PDB entry 2vpw

View 2vpw on RCSB PDB site
Description: polysulfide reductase with bound menaquinone
Deposited on 2008-03-09, released 2008-06-10
The last revision was dated 2019-02-06, with a file datestamp of 2019-02-01.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: thiosulfate reductase
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: nrfc protein
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: hypothetical Membrane Spanning Protein
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: thiosulfate reductase
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: nrfc protein
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: hypothetical Membrane Spanning Protein
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SF4, MGD, MO, MQ7, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vpwA (A:)
mqrreflklsalgvgamalrgsgpakalkapwyaqevksvyqicegcfwrcgivahavgn
rvykvegyeanpksrgrlcprgqgapqttydpdrlkrplirvegsqrgegkyrvatweea
ldhiakkmleirekygpeaiaffghgtgdywfvdflpaawgspnaakpsvslctapreva
sqwvfgrpigghepidwenaryivlighhigedthntqlqdfalalkngakvvvvdprfs
taaakahrwlpikpgtdtalllawihvliyedlydkeyvakytvgfeelkahvkdftpew
aekhteipaqvirevaremaahkpravlpptrhnvwygddtyrvmallyvnvllgnygrp
ggfyiaqspylekyplpplplepaaggcsgpsggdhepegfkpradkgkffarstaiqel
iepmitgepypikglfayginlfhsipnvprtkealknldlyvaidvlpqehvmwadvil
peatyleryddfvlvahktpfiqlrtpaheplfdtkpgwwiarelglrlgleqyfpwkti
eeyletrlqslgldletmkgmgtlvqrgkpwledwekegrlpfgtasgkielycqrfkea
ghqplpvftppeeppegfyrllygrspvhtfartqnnwvlmemdpenevwihkeeakrlg
lkegdyvmlvnqdgvkegpvrvkptarirkdcvyivhgfghkaplmrlahgrgasdnylq
trykldpisggaglrvnfvrlekaerprlpsltglakrpfderrm

    Sequence, based on observed residues (ATOM records):
    >2vpwA (A:)
apwyaqevksvyqicegcfwrcgivahavgnrvykvegyeanpksrgrlcprgqgapqtt
ydpdrlkrplirvegsqrgegkyrvatweealdhiakkmleirekygpeaiaffghgtgd
ywfvdflpaawgspnaakpsvslctaprevasqwvfgrpigghepidwenaryivlighh
igedthntqlqdfalalkngakvvvvdprfstaaakahrwlpikpgtdtalllawihvli
yedlydkeyvakytvgfeelkahvkdftpewaekhteipaqvirevaremaahkpravlp
ptrhnvwygddtyrvmallyvnvllgnygrpggfyiaqspylekyplpplplepaaggcs
gpsggdhepegfkpradkgkffarstaiqeliepmitgepypikglfayginlfhsipnv
prtkealknldlyvaidvlpqehvmwadvilpeatyleryddfvlvahktpfiqlrtpah
eplfdtkpgwwiarelglrlgleqyfpwktieeyletrlqslgldletmkgmgtlvqrgk
pwledwekegrlpfgtasgkielycqrfkeaghqplpvftppeeppegfyrllygrspvh
tfartqnnwvlmemdpenevwihkeeakrlglkegdyvmlvnqdgvkegpvrvkptarir
kdcvyivhgfghkaplmrlahgrgasdnylqtrykldpisggaglrvnfvrlekaerprl
psltglakrpfderr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vpwB (B:)
mpryamaidlslcvgcaacavackmenevppgvfnlwirerevgeypnlvvefrpeqclh
cenppcvpvcptgasyqtkdglvlvdpkkciacgaciaacpydarylhpagyvskctfca
hrlekgkvpacvetcptycrtfgdledpespvakalkaaervdvlrpeqgtrpklfylna
pskkgltresevhhg

    Sequence, based on observed residues (ATOM records):
    >2vpwB (B:)
mpryamaidlslcvgcaacavackmenevppgvfnlwirerevgeypnlvvefrpeqclh
cenppcvpvcptgasyqtkdglvlvdpkkciacgaciaacpydarylhpagyvskctfca
hrlekgkvpacvetcptycrtfgdledpespvakalkaaervdvlrpeqgtrpklfylna
pskkgltresevhh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vpwC (C:)
maefyglpnaqefwhwtnalhfvlvglaggvallaallhlkgdaearrytlyalmliald
lfilwaesparfrfthiwlflsfhptspiwwgawglglgfltggllylgkgsqralawal
lvfslvalsypglalavnlnrplwnglmaglfpltalvlalglaallkspwalfplrvla
gaslllallypltlppearghlleeagfwyglflllglgtfwqerlapwagllaaaglra
llvlagqwqglgl

    Sequence, based on observed residues (ATOM records):
    >2vpwC (C:)
aefyglpnaqefwhwtnalhfvlvglaggvallaallhlkgdaearrytlyalmlialdl
filwaesparfrfthiwlflsfhptspiwwgawglglgfltggllylgkgsqralawall
vfslvalsypglalavnlnrplwnglmaglfpltalvlalglaallkspwalfplrvlag
aslllallypltlppearghlleeagfwyglflllglgtfwqerlapwagllaaaglral
lvlagqwqglg

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2vpwE (E:)
mqrreflklsalgvgamalrgsgpakalkapwyaqevksvyqicegcfwrcgivahavgn
rvykvegyeanpksrgrlcprgqgapqttydpdrlkrplirvegsqrgegkyrvatweea
ldhiakkmleirekygpeaiaffghgtgdywfvdflpaawgspnaakpsvslctapreva
sqwvfgrpigghepidwenaryivlighhigedthntqlqdfalalkngakvvvvdprfs
taaakahrwlpikpgtdtalllawihvliyedlydkeyvakytvgfeelkahvkdftpew
aekhteipaqvirevaremaahkpravlpptrhnvwygddtyrvmallyvnvllgnygrp
ggfyiaqspylekyplpplplepaaggcsgpsggdhepegfkpradkgkffarstaiqel
iepmitgepypikglfayginlfhsipnvprtkealknldlyvaidvlpqehvmwadvil
peatyleryddfvlvahktpfiqlrtpaheplfdtkpgwwiarelglrlgleqyfpwkti
eeyletrlqslgldletmkgmgtlvqrgkpwledwekegrlpfgtasgkielycqrfkea
ghqplpvftppeeppegfyrllygrspvhtfartqnnwvlmemdpenevwihkeeakrlg
lkegdyvmlvnqdgvkegpvrvkptarirkdcvyivhgfghkaplmrlahgrgasdnylq
trykldpisggaglrvnfvrlekaerprlpsltglakrpfderrm

    Sequence, based on observed residues (ATOM records):
    >2vpwE (E:)
apwyaqevksvyqicegcfwrcgivahavgnrvykvegyeanpksrgrlcprgqgapqtt
ydpdrlkrplirvegsqrgegkyrvatweealdhiakkmleirekygpeaiaffghgtgd
ywfvdflpaawgspnaakpsvslctaprevasqwvfgrpigghepidwenaryivlighh
igedthntqlqdfalalkngakvvvvdprfstaaakahrwlpikpgtdtalllawihvli
yedlydkeyvakytvgfeelkahvkdftpewaekhteipaqvirevaremaahkpravlp
ptrhnvwygddtyrvmallyvnvllgnygrpggfyiaqspylekyplpplplepaaggcs
gpsggdhepegfkpradkgkffarstaiqeliepmitgepypikglfayginlfhsipnv
prtkealknldlyvaidvlpqehvmwadvilpeatyleryddfvlvahktpfiqlrtpah
eplfdtkpgwwiarelglrlgleqyfpwktieeyletrlqslgldletmkgmgtlvqrgk
pwledwekegrlpfgtasgkielycqrfkeaghqplpvftppeeppegfyrllygrspvh
tfartqnnwvlmemdpenevwihkeeakrlglkegdyvmlvnqdgvkegpvrvkptarir
kdcvyivhgfghkaplmrlahgrgasdnylqtrykldpisggaglrvnfvrlekaerprl
psltglakrpfderr

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2vpwF (F:)
mpryamaidlslcvgcaacavackmenevppgvfnlwirerevgeypnlvvefrpeqclh
cenppcvpvcptgasyqtkdglvlvdpkkciacgaciaacpydarylhpagyvskctfca
hrlekgkvpacvetcptycrtfgdledpespvakalkaaervdvlrpeqgtrpklfylna
pskkgltresevhhg

    Sequence, based on observed residues (ATOM records):
    >2vpwF (F:)
mpryamaidlslcvgcaacavackmenevppgvfnlwirerevgeypnlvvefrpeqclh
cenppcvpvcptgasyqtkdglvlvdpkkciacgaciaacpydarylhpagyvskctfca
hrlekgkvpacvetcptycrtfgdledpespvakalkaaervdvlrpeqgtrpklfylna
pskkgltresevhh

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2vpwG (G:)
maefyglpnaqefwhwtnalhfvlvglaggvallaallhlkgdaearrytlyalmliald
lfilwaesparfrfthiwlflsfhptspiwwgawglglgfltggllylgkgsqralawal
lvfslvalsypglalavnlnrplwnglmaglfpltalvlalglaallkspwalfplrvla
gaslllallypltlppearghlleeagfwyglflllglgtfwqerlapwagllaaaglra
llvlagqwqglgl

    Sequence, based on observed residues (ATOM records):
    >2vpwG (G:)
aefyglpnaqefwhwtnalhfvlvglaggvallaallhlkgdaearrytlyalmlialdl
filwaesparfrfthiwlflsfhptspiwwgawglglgfltggllylgkgsqralawall
vfslvalsypglalavnlnrplwnglmaglfpltalvlalglaallkspwalfplrvlag
aslllallypltlppearghlleeagfwyglflllglgtfwqerlapwagllaaaglral
lvlagqwqglg