PDB entry 2von

View 2von on RCSB PDB site
Description: crystal structure of n-terminal domains of human la protein complexed with RNA oligomer auaauuu
Class: RNA-binding protein
Keywords: RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation, RNA binding protein, nucleus, la motif, RNA-binding, polymorphism
Deposited on 2008-02-19, released 2008-05-06
The last revision prior to the SCOP 1.75 freeze date was dated 2008-07-01, with a file datestamp of 2008-06-27.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.23
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lupus La protein
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2vona1, d2vona2
  • Chain 'B':
    Compound: Lupus La protein
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2vonb1, d2vonb2
  • Chain 'C':
    Compound: 5'-r(*ap*up*ap*ap*up*up*up)-3'
  • Chain 'D':
    Compound: 5'-r(*ap*up*ap*ap*up*up*up)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vonA (A:)
gsngdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrl
ttdfnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptd
atlddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdll
ilfkddyfakkne

    Sequence, based on observed residues (ATOM records): (download) 
    >2vonA (A:)
dnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrlttdf
nvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptdatld
dikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdllilfk
ddyfakk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2vonB (B:)
gsngdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrl
ttdfnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptd
atlddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdll
ilfkddyfakkne

    Sequence, based on observed residues (ATOM records): (download) 
    >2vonB (B:)
nekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrlttdfn
vivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptdatldd
ikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdllilfkd
dyfakk

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.