PDB entry 2von

View 2von on RCSB PDB site
Description: Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAAUUU
Class: RNA binding protein
Keywords: RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation, RNA binding protein, nucleus, la motif, RNA-binding, polymorphism
Deposited on 2008-02-19, released 2008-05-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-09, with a file datestamp of 2019-10-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lupus La protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2vona1, d2vona2
  • Chain 'B':
    Compound: Lupus La protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2vonb1, d2vonb2
  • Chain 'C':
    Compound: 5'-r(*ap*up*ap*ap*up*up*up)-3'
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: 5'-r(*ap*up*ap*ap*up*up*up)-3'
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2vonA (A:)
    gsngdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrl
    ttdfnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptd
    atlddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdll
    ilfkddyfakkne
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vonA (A:)
    dnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrlttdf
    nvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptdatld
    dikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdllilfk
    ddyfakk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2vonB (B:)
    gsngdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrl
    ttdfnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptd
    atlddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdll
    ilfkddyfakkne
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vonB (B:)
    nekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrlttdfn
    vivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptdatldd
    ikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdllilfkd
    dyfakk
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.