PDB entry 2vnp

View 2vnp on RCSB PDB site
Description: monoclinic form of idi-1
Class: isomerase
Keywords: isoprene biosynthesis, polymorphism, metal-binding, ipp isomerase, manganese, cytoplasm, isomerase, magnesium
Deposited on 2008-02-06, released 2008-03-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.19 Å
R-factor: 0.197
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Isopentenyl-diphosphate delta-isomerase
    Species: ESCHERICHIA COLI [TaxId:511693]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2vnpa_
  • Chain 'B':
    Compound: Isopentenyl-diphosphate delta-isomerase
    Species: ESCHERICHIA COLI [TaxId:511693]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q46822 (Start-181)
    • PDB 2VNP (182-182)
    Domains in SCOPe 2.08: d2vnpb2, d2vnpb3
  • Heterogens: MN, MG, DED, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vnpA (A:)
mqtehvillnaqgvptgtlekyaahtadtrlhlafsswlfnakgqllvtrralskkawpg
vwtnsvcghpqlgesnedavirrcryelgveitppesiypdfryratdpsgivenevcpv
faarttsalqinddevmdyqwcdladvlhgidatpwafspwmvmqatnrearkrlsaftq
lkl

    Sequence, based on observed residues (ATOM records): (download) 
    >2vnpA (A:)
ehvillnaqgvptgtlekyaahtadtrlhlafsswlfnakgqllvtrralskkawpgvwt
nsvcghpqlgesnedavirrcryelgveitppesiypdfryratdpsgivenevcpvfaa
rttsalqinddevmdyqwcdladvlhgidatpwafspwmvmqatnrearkrlsaft

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2vnpB (B:)
mqtehvillnaqgvptgtlekyaahtadtrlhlafsswlfnakgqllvtrralskkawpg
vwtnsvcghpqlgesnedavirrcryelgveitppesiypdfryratdpsgivenevcpv
faarttsalqinddevmdyqwcdladvlhgidatpwafspwmvmqatnrearkrlsaftq
lkl

    Sequence, based on observed residues (ATOM records): (download) 
    >2vnpB (B:)
ehvillnaqgvptgtlekyaahtadtrlhlafsswlfnakgqllvtrralskkawpgvwt
nsvcghpqlgesnedavirrcryelgveitppesiypdfryratdpsgivenevcpvfaa
rttsalqinddevmdyqwcdladvlhgidatpwafspwmvmqatnrearkrlsaftqlkl