PDB entry 2vng
View 2vng on RCSB PDB site
Description: family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by clostridium perfringens in complex with blood group a-trisaccharide ligand.
Class: hydrolase
Keywords: family 51 carbohydrate binding module, clostridium perfringens, family 98 glycoside hydrolase, a-trisaccharide, blood group antigen, hydrolase
Deposited on
2008-02-04, released
2008-02-19
The last revision prior to the SCOP 1.75 freeze date was dated
2008-05-06, with a file datestamp of
2008-05-02.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.18683
AEROSPACI score: 0.78
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: cpe0329
Species: Clostridium perfringens
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2vnga1 - Chain 'B':
Compound: cpe0329
Species: Clostridium perfringens
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2vngb1 - Heterogens: CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vngA (A:)
evyaleesrdvylsdldwlnathgddtkskivqknhpftpgnnnqstkislkmedgsise
fekglgtiagspstitydisgagvtkffsylgidrsanpineqyakvdkievvvdgkviy
stinqfpngltyetpaikvdlnipenakrlqlksyagektwgdevvyadakftakgdfvn
Sequence, based on observed residues (ATOM records): (download)
>2vngA (A:)
srdvylsdldwlnathgddtkskivqknhpftpgnnnqstkislkmedgsisefekglgt
iagspstitydisgagvtkffsylgidrsanpineqyakvdkievvvdgkviystinqfp
ngltyetpaikvdlnipenakrlqlksyagektwgdevvyadakftakgdf
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vngB (B:)
evyaleesrdvylsdldwlnathgddtkskivqknhpftpgnnnqstkislkmedgsise
fekglgtiagspstitydisgagvtkffsylgidrsanpineqyakvdkievvvdgkviy
stinqfpngltyetpaikvdlnipenakrlqlksyagektwgdevvyadakftakgdfvn
Sequence, based on observed residues (ATOM records): (download)
>2vngB (B:)
esrdvylsdldwlnathgddtkskivqknhpftpgnnnqstkislkmedgsisefekglg
tiagspstitydisgagvtkffsylgidrsanpineqyakvdkievvvdgkviystinqf
pngltyetpaikvdlnipenakrlqlksyagektwgdevvyadakftakgdfv