PDB entry 2vnc

View 2vnc on RCSB PDB site
Description: crystal structure of glycogen debranching enzyme trex from sulfolobus solfataricus
Deposited on 2008-02-04, released 2008-07-29
The last revision was dated 2011-03-16, with a file datestamp of 2011-03-11.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.218
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycogen operon protein glgx
    Species: Sulfolobus solfataricus [TaxId:2287]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: glycogen operon protein glgx
    Species: Sulfolobus solfataricus [TaxId:2287]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vncA (A:)
    malffrtrdrplrpgdpyplgsnwiedddgvnfslfsenaekvelllysltnqkypkeii
    evknktgdiwhvfvpglrpgqlyayrvygpykpelglrfnpnkvlidpyakaingsviwn
    davfgykigdqnqdltyderdsgeyvpksvvinpyfewddedfikgkkvplkdtviyevh
    vkgftklrldlpenirgtyeglaseqmisylkdlgittvelmpvfhfidqrfltdkgltn
    ywgydpinffspecrysstgclggqvlsfkkmvnelhnagieviidvvynhtaegnhlgp
    tlsfrgidntayymlqpdnkryyldftgtgntlnlshprviqmvldslrywvtemhvdgf
    rfdlaaalarelysvnmlntffialqqdpilsqvkliaepwdvgqggyqvgnfpyqwaew
    ngkyrdsirrfwrgealpyseianrllgspdiylgnnktpfasinyvtshdgftledlvs
    ynqkhneangfnnqdgmnenyswncgaegptndqnvvicrekqkrnfmitllvsqgtpmi
    lggdelsrtqrgnnnafcqdneitwfdwnlderkskflefvkkmiqfyrahpafrreryf
    qgkklfgmplkdvtfytlegrevdektwssptqlvifvlegsvmdeinmygeriaddsfl
    iilnanpnnvkvkfpkgkwelvissylreikpeeriiegekeleiegrtalvyrriel
    

    Sequence, based on observed residues (ATOM records):
    >2vncA (A:)
    drplrpgdpyplgsnwiedddgvnfslfsenaekvelllysltnqkypkeiievknktgd
    iwhvfvpglrpgqlyayrvygpykpelglrfnpnkvlidpyakaingsviwndavfgyki
    gdqnqdltyderdsgeyvpksvvinpyfewddedfikgkkvplkdtviyevhvkgftklr
    ldlpenirgtyeglaseqmisylkdlgittvelmpvfhfidqrfltdkgltnywgydpin
    ffspecrysstgclggqvlsfkkmvnelhnagieviidvvynhtaegnhlgptlsfrgid
    ntayymlqpdnkryyldftgtgntlnlshprviqmvldslrywvtemhvdgfrfdlaaal
    arelysvnmlntffialqqdpilsqvkliaepwdvgqggyqvgnfpyqwaewngkyrdsi
    rrfwrgealpyseianrllgspdiylgnnktpfasinyvtshdgftledlvsynqkhnea
    ngfnnqdgmnenyswncgaegptndqnvvicrekqkrnfmitllvsqgtpmilggdelsr
    tqrgnnnafcqdneitwfdwnlderkskflefvkkmiqfyrahpafrreryfdvtfytle
    grevdektwssptqlvifvlegsvmdeinmygeriaddsfliilnanpnnvkvkfpkgkw
    elvissylreikpeeriiegekeleiegrtalvyrriel
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vncB (B:)
    malffrtrdrplrpgdpyplgsnwiedddgvnfslfsenaekvelllysltnqkypkeii
    evknktgdiwhvfvpglrpgqlyayrvygpykpelglrfnpnkvlidpyakaingsviwn
    davfgykigdqnqdltyderdsgeyvpksvvinpyfewddedfikgkkvplkdtviyevh
    vkgftklrldlpenirgtyeglaseqmisylkdlgittvelmpvfhfidqrfltdkgltn
    ywgydpinffspecrysstgclggqvlsfkkmvnelhnagieviidvvynhtaegnhlgp
    tlsfrgidntayymlqpdnkryyldftgtgntlnlshprviqmvldslrywvtemhvdgf
    rfdlaaalarelysvnmlntffialqqdpilsqvkliaepwdvgqggyqvgnfpyqwaew
    ngkyrdsirrfwrgealpyseianrllgspdiylgnnktpfasinyvtshdgftledlvs
    ynqkhneangfnnqdgmnenyswncgaegptndqnvvicrekqkrnfmitllvsqgtpmi
    lggdelsrtqrgnnnafcqdneitwfdwnlderkskflefvkkmiqfyrahpafrreryf
    qgkklfgmplkdvtfytlegrevdektwssptqlvifvlegsvmdeinmygeriaddsfl
    iilnanpnnvkvkfpkgkwelvissylreikpeeriiegekeleiegrtalvyrriel
    

    Sequence, based on observed residues (ATOM records):
    >2vncB (B:)
    trdrplrpgdpyplgsnwiedddgvnfslfsenaekvelllysltnqkypkeiievknkt
    gdiwhvfvpglrpgqlyayrvygpykpelglrfnpnkvlidpyakaingsviwndavfgy
    kigdqnqdltyderdsgeyvpksvvinpyfewddedfikgkkvplkdtviyevhvkgftk
    lrldlpenirgtyeglaseqmisylkdlgittvelmpvfhfidqrfltdkgltnywgydp
    inffspecrysstgclggqvlsfkkmvnelhnagieviidvvynhtaegnhlgptlsfrg
    idntayymlqpdnkryyldftgtgntlnlshprviqmvldslrywvtemhvdgfrfdlaa
    alarelysvnmlntffialqqdpilsqvkliaepwdvgqggyqvgnfpyqwaewngkyrd
    sirrfwrgealpyseianrllgspdinnktpfasinyvtshdgftledlvsynhneangf
    nnqdgmnenyswncgdqnvvicrekqkrnfmitllvsqgtpmilggdelsrtqrgnnnaf
    cqdneitwfdwnlderkskflefvkkmiqfyrahpafrrerdvtfytlegrevdektwss
    ptqlvifvlegdsfliilnanpnnvkvkfpkgkwelvissylreikpeegekeleiegrt
    alvyrr