PDB entry 2vmy
View 2vmy on RCSB PDB site
Description: crystal structure of f351gbsshmt in complex with gly and fthf
Class: transferase
Keywords: transferase, one-carbon metabolism, plp-dependent enzymes, serine ternary complex, pyridoxal phosphate, f351g, folate binding
Deposited on
2008-01-29, released
2008-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-09-14, with a file datestamp of
2011-09-09.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.218
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: serine hydroxymethyltransferase
Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
Database cross-references and differences (RAF-indexed):
- Uniprot Q7SIB6 (0-404)
- engineered mutation (350)
Domains in SCOPe 2.08: d2vmya_ - Chain 'B':
Compound: serine hydroxymethyltransferase
Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
Database cross-references and differences (RAF-indexed):
- Uniprot Q7SIB6 (0-404)
- engineered mutation (350)
Domains in SCOPe 2.08: d2vmyb_ - Heterogens: GLY, PLP, FFO, MRD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2vmyA (A:)
mkylpqqdpqvfaaieqerkrqhakieliasenfvsravmeaqgsvltnkyaegypgrry
yggceyvdiveelarerakqlfgaehanvqphsgaqanmavyftvlehgdtvlgmnlshg
ghlthgspvnfsgvqynfvaygvdpethvidyddvrekarlhrpklivaaasaypriidf
akfreiadevgaylmvdmahiaglvaaglhpnpvpyahfvtttthktlrgprggmilcqe
qfakqidkaifpgiqggplmhviaakavafgealqddfkayakrvvdnakrlasalqneg
ftlvsggtdnhlllvdlrpqqltgktaekvldevgitvnkntipydpespgvtsgirigt
aavttrgfgleemdeiaaiiglvlknvgseqaleearqrvaaltd
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2vmyB (B:)
mkylpqqdpqvfaaieqerkrqhakieliasenfvsravmeaqgsvltnkyaegypgrry
yggceyvdiveelarerakqlfgaehanvqphsgaqanmavyftvlehgdtvlgmnlshg
ghlthgspvnfsgvqynfvaygvdpethvidyddvrekarlhrpklivaaasaypriidf
akfreiadevgaylmvdmahiaglvaaglhpnpvpyahfvtttthktlrgprggmilcqe
qfakqidkaifpgiqggplmhviaakavafgealqddfkayakrvvdnakrlasalqneg
ftlvsggtdnhlllvdlrpqqltgktaekvldevgitvnkntipydpespgvtsgirigt
aavttrgfgleemdeiaaiiglvlknvgseqaleearqrvaaltd