PDB entry 2vme

View 2vme on RCSB PDB site
Description: structure of the wild-type discoidin ii from dictyostelium discoideum
Deposited on 2008-01-25, released 2008-07-01
The last revision was dated 2011-06-08, with a file datestamp of 2011-06-03.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.184
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: discoidin-2
    Species: DICTYOSTELIUM DISCOIDEUM [TaxId:366501]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: discoidin-2
    Species: DICTYOSTELIUM DISCOIDEUM [TaxId:366501]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: discoidin-2
    Species: DICTYOSTELIUM DISCOIDEUM [TaxId:366501]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: discoidin-2
    Species: DICTYOSTELIUM DISCOIDEUM [TaxId:366501]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: discoidin-2
    Species: DICTYOSTELIUM DISCOIDEUM [TaxId:366501]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: discoidin-2
    Species: DICTYOSTELIUM DISCOIDEUM [TaxId:366501]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, ZN, CL, GOL, PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2vmeA (A:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefnn

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2vmeB (B:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefnn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vmeC (C:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefnn

    Sequence, based on observed residues (ATOM records):
    >2vmeC (C:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefn

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2vmeD (D:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefnn

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2vmeE (E:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefnn

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2vmeF (F:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefnn

    Sequence, based on observed residues (ATOM records):
    >2vmeF (F:)
msvpagsvsclanallnlrsstdynadhgvknsilnfsnskdasrfdgseswsssvldkn
qfivagsdsvkhfvaistqgrgdhdqwvtsyklrytldnvnwveynngeiinankdrnsi
vtinfnppikarsiaihpqtynnhislrwelyalpvksysnpsvqvgevsigdrslnsgt
gsrtivrhvkfpveflsvpivsigckkvdahtdngqmrwegksenittkgfdltfitwgn
navydltfdyvavefn