PDB entry 2vla
View 2vla on RCSB PDB site
Description: crystal structure of restriction endonuclease bpuji recognition domain in complex with cognate dna
Deposited on
2008-01-11, released
2008-05-06
The last revision was dated
2019-07-24, with a file datestamp of
2019-07-19.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: N/A
AEROSPACI score: 0.59
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: restriction endonuclease r.bpuji
Species: BACILLUS PUMILUS [TaxId:1408]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: 5'-d(*gp*gp*tp*ap*cp*cp*cp*gp*tp*gp *gp*a)-3'
- Chain 'M':
Compound: 5'-d(*tp*cp*cp*ap*cp*gp*gp*gp*tp*ap *cp*c)-3'
- Heterogens: PG6, NA, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence, based on SEQRES records:
>2vlaA (A:)
mnynpeeqfrctiirgkaknmldnllpayaniiddicpcdkasfvkdfnnrlieilgeet
tkktldnhrteiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmd
kldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpiev
iekiiedrsnditkkvrhpgketsysmqhireqlnylelanliridgnlvklnyreaeni
nyiaqfwgnkpefnaykydftseddkksffkdwqqyysnvnshks
Sequence, based on observed residues (ATOM records):
>2vlaA (A:)
mnynpeeqfrctiirgkaknmldnllpayaniiddicpcdkasfvkdfnnrlieilgeet
tkktldnhrteiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmd
kldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpiev
iekiiedrsnditkkvrhpgketsysmqhireqlnylelanliridgnlvklnyreaeni
nyiaqfwgnkpefnaykydftseddkksffkdwqqyysnv
- Chain 'L':
No sequence available.
- Chain 'M':
No sequence available.