PDB entry 2vl0

View 2vl0 on RCSB PDB site
Description: x-ray structure of a pentameric ligand gated ion channel from erwinia chrysanthemi (elic)
Deposited on 2008-01-07, released 2008-03-11
The last revision was dated 2019-10-09, with a file datestamp of 2019-10-04.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'B':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'C':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'D':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'E':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'F':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'G':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'H':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'I':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)
  • Chain 'J':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7
      • conflict (287)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vl0A (A:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0A (A:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vl0B (B:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0B (B:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vl0C (C:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0C (C:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2vl0D (D:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0D (D:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2vl0E (E:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0E (E:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2vl0F (F:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0F (F:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2vl0G (G:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0G (G:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2vl0H (H:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0H (H:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'I':
    Sequence, based on SEQRES records:
    >2vl0I (I:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0I (I:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi

  • Chain 'J':
    Sequence, based on SEQRES records:
    >2vl0J (J:)
apadnaadarpvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliven
tqierwinnglwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfp
fdrqqfvlelepfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssv
qpnqnefsritvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmlt
vvayafytsnilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcr
lafplgflaigcvlvirgitl

    Sequence, based on observed residues (ATOM records):
    >2vl0J (J:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqlrfsdiqvytenidneeidewwirkasthisdirydhlssvqpnqnefsri
tvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafytsn
ilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgflai
gcvlvi