PDB entry 2vkr

View 2vkr on RCSB PDB site
Description: 3Fe-4S, 4Fe-4S plus Zn Acidianus ambivalens ferredoxin
Class: electron transport
Keywords: zinc, iron, 3fe-4s, 4fe-4s, transport, zn center, hemihedric twinnig, iron-sulfur protein, ferredoxin, methylation, thermophile, iron-sulfur, thermostable protein, metal-binding, protein folding, electron transport
Deposited on 2007-12-23, released 2008-03-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-22, with a file datestamp of 2019-05-17.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkra_
• Chain 'B':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkrb_
• Chain 'C':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkrc_
• Chain 'D':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkrd_
• Chain 'E':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkre_
• Chain 'F':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkrf_
• Chain 'G':
  Compound: zinc-containing ferredoxin
  Species: ACIDIANUS AMBIVALENS [TaxId:2283]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P49949 (0-102)
  Domains in SCOPe 2.08: d2vkrg_
• Heterogens: F3S, SF4, ZN, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrA (A:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrB (B:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrC (C:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrD (D:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp
  

  
  
• Chain 'E':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrE (E:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp
  

  
  
• Chain 'F':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrF (F:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp
  

  
  
• Chain 'G':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vkrG (G:)
  gidpnyrtsrqvvgehqghkvygpvdppkvlgihgtivgvdfdlciadgscitacpvnvf
  qwydtpghpasekkadpineqacifcmacvnvcpvaaidvkpp