PDB entry 2vk6

View 2vk6 on RCSB PDB site
Description: the structure of clostridium perfringens nani sialidase and its catalytic intermediates
Deposited on 2007-12-17, released 2008-01-22
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exo-alpha-sialidase
    Species: Clostridium perfringens [TaxId:1502]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q59310 (0-End)
      • conflict (150)
  • Heterogens: CA, DAN, MG, PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vk6A (A:)
vegavktepvdlfhpgflnssnyripalfktkegtliasidarrhggadapnndidtavr
rsedggktwdegqiimdypdkssvidttliqddetgrifllvthfpskygfwnaglgsgf
knidgkeylclydssgkeftvrenvvydkdsnkteyttnalgdlfkngtkidninsstap
lkakgtsyinlvysdddgktwsepqninfqvkkdwmkflgiapgrgiqikngehkgrivv
pvyytnekgkqssaviysddsgknwtigespndnrklengkiinsktlsddapqltecqv
vempngqlklfmrnlsgylniatsfdggatwdetvekdtnvlepycqlsvinysqkvdgk
davifsnpnarsrsngtvriglinqvgtyengepkyefdwkynklvkpgyyayscltels
ngnigllyegtpseemsyiemnlkylesgank

    Sequence, based on observed residues (ATOM records):
    >2vk6A (A:)
vegavktepvdlfhpgflnssnyripalfktkegtliasidarrhggadapnndidtavr
rsedggktwdegqiimdypdkssvidttliqddetgrifllvthfpskygfwnaglgsgf
knidgkeylclydssgkeftvrenvvydkdsnkteyttnalgdlfkngtkidninsstap
lkakgtsyinlvysdddgktwsepqninfqvkkdwmkflgiapgrgiqikngehkgrivv
pvyytnekgkqssaviysddsgknwtigespndnrklengkiinsktlsddapqltecqv
vempngqlklfmrnlsgylniatsfdggatwdetvekdtnvlepycqlsvinysqkvdgk
davifsnpnarsrsngtvriglinqvgtyengepkyefdwkynklvkpgyyayscltels
ngnigllyegtpseemsyiemnlkylesg