PDB entry 2vjl

View 2vjl on RCSB PDB site
Description: formyl-coa transferase with aspartyl-coa thioester intermediate derived from formyl-coa
Class: transferase
Keywords: cytoplasm, transferase, class III coa transferase
Deposited on 2007-12-11, released 2007-12-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.199
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Formyl-coenzyme A transferase
    Species: OXALOBACTER FORMIGENES [TaxId:847]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06644 (Start-427)
      • conflict see remark 9 (185)
    Domains in SCOPe 2.08: d2vjla_
  • Chain 'B':
    Compound: Formyl-coenzyme A transferase
    Species: OXALOBACTER FORMIGENES [TaxId:847]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06644 (Start-427)
      • conflict see remark 9 (185)
    Domains in SCOPe 2.08: d2vjlb_
  • Heterogens: COA, CL, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2vjlA (A:)
    mtkpldginvldfthvqagpactqmmgflganvikierrgsgdmtrgwlqdkpnvdslyf
    tmfncnkrsieldmktpegkelleqmikkadvmvenfgpgaldrmgftweyiqelnprvi
    lasvkgyaeghanehlkvyenvaqcsggaaattgfwdgpptvsgaalgdsnsgmhlmigi
    laaleirhktgrgqkvavamqdavlnlvriklrdqqrlertgilaeypqaqpnfafdrdg
    nplsfdnitsvprggnaggggqpgwmlkckgwetdadsyvyftiaanmwpqicdmidkpe
    wkddpayntfegrvdklmdifsfietkfadkdkfevtewaaqygipcgpvmsmkelahdp
    slqkvgtvvevvdeirgnhltvgapfkfsgfqpeitrapllgehtdevlkelglddakik
    elhakqvv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vjlA (A:)
    tkpldginvldfthvqagpactqmmgflganvikierrgsgdmtrgwlqdkpnvdslyft
    mfncnkrsieldmktpegkelleqmikkadvmvenfgpgaldrmgftweyiqelnprvil
    asvkgyaeghanehlkvyenvaqcsggaaattgfwdgpptvsgaalgdsnsgmhlmigil
    aaleirhktgrgqkvavamqdavlnlvriklrdqqrlertgilaeypqaqpnfafdrdgn
    plsfdnitsvprggnaggggqpgwmlkckgwetdadsyvyftiaanmwpqicdmidkpew
    kddpayntfegrvdklmdifsfietkfadkdkfevtewaaqygipcgpvmsmkelahdps
    lqkvgtvvevvdeirgnhltvgapfkfsgfqpeitrapllgehtdevlkelglddakike
    lhakqvv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2vjlB (B:)
    mtkpldginvldfthvqagpactqmmgflganvikierrgsgdmtrgwlqdkpnvdslyf
    tmfncnkrsieldmktpegkelleqmikkadvmvenfgpgaldrmgftweyiqelnprvi
    lasvkgyaeghanehlkvyenvaqcsggaaattgfwdgpptvsgaalgdsnsgmhlmigi
    laaleirhktgrgqkvavamqdavlnlvriklrdqqrlertgilaeypqaqpnfafdrdg
    nplsfdnitsvprggnaggggqpgwmlkckgwetdadsyvyftiaanmwpqicdmidkpe
    wkddpayntfegrvdklmdifsfietkfadkdkfevtewaaqygipcgpvmsmkelahdp
    slqkvgtvvevvdeirgnhltvgapfkfsgfqpeitrapllgehtdevlkelglddakik
    elhakqvv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vjlB (B:)
    tkpldginvldfthvqagpactqmmgflganvikierrgsgdmtrgwlqdkpnvdslyft
    mfncnkrsieldmktpegkelleqmikkadvmvenfgpgaldrmgftweyiqelnprvil
    asvkgyaeghanehlkvyenvaqcsggaaattgfwdgpptvsgaalgdsnsgmhlmigil
    aaleirhktgrgqkvavamqdavlnlvriklrdqqrlertgilaeypqaqpnfafdrdgn
    plsfdnitsvprggnaggggqpgwmlkckgwetdadsyvyftiaanmwpqicdmidkpew
    kddpayntfegrvdklmdifsfietkfadkdkfevtewaaqygipcgpvmsmkelahdps
    lqkvgtvvevvdeirgnhltvgapfkfsgfqpeitrapllgehtdevlkelglddakike
    lhakqvv