PDB entry 2vit
View 2vit on RCSB PDB site
Description: influenza virus hemagglutinin, mutant with thr 155 replaced by ile, complexed with a neutralizing antibody
Class: complex (hemagglutinin/immmunoglobulin)
Keywords: complex (hemagglutinin/immmunoglobulin), glycoprotein
Deposited on
1997-12-22, released
1998-04-29
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 3.25 Å
R-factor: 0.188
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: immunoglobulin (igg1, lambda)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vita1, d2vita2 - Chain 'B':
Compound: immunoglobulin (igg1, lambda)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAD00000 (0-220)
- conflict (2)
- conflict (4)
- conflict (27)
- conflict (29)
- conflict (31)
- conflict (62)
- conflict (68)
- conflict (82)
- conflict (91)
- insertion (97-99)
- conflict (101-102)
- insertion (104-109)
- conflict (116)
- conflict (121)
- conflict (134)
Domains in SCOPe 2.08: d2vitb1, d2vitb2 - Chain 'C':
Compound: Hemagglutinin
Species: Influenza A virus (A/X-31(H3N2)) [TaxId:132504]
Database cross-references and differences (RAF-indexed):
- Uniprot P03437 (Start-281)
- modified residue (53)
- engineered (127)
- modified residue (137)
- modified residue (257)
Domains in SCOPe 2.08: d2vitc_ - Heterogens: ZN
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2vitA (A:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnnrapgv
parfsgsligdkaaltitgaqtedeaiyfcalwysnhwvfgggtkltvlgqpksspsvtl
fppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassy
ltltarawerhssyscqvtheghtveksls
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2vitB (B:)
qvqlkesgpglvapsqslsitctvsgfllisngvhwvrqppgkglewlgviwaggntnyn
salmsrvsiskdnsksqvflkmkslqtddtamyycardfydydvfyyamdywgqgtsvtv
ssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlq
sdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2vitC (C:)
titddqievtnatelvqssstgkicnnphrildgidctlidallgdphcdvfqdetwdlf
verskafsncypydvpdyaslrslvassgtlefitegftwtgvtqnggsnackrgpgsgf
fsrlnwliksgstypvldvtmpnndnfdklyiwgihhpstnqeqtslyvqasgrvtvstr
rsqqtiipnigsrpwvrglssrisiywtivkpgdvlvinsngnliaprgyfkmrtgkssi
mrsdapidtcisecitpdgsipndkpfqnvnkitygacpkyv
Sequence, based on observed residues (ATOM records): (download)
>2vitC (C:)
vqssstgkicnnphrildgidctlidallgdphcdvfqdetwdlfverskafsncypydv
pdyaslrslvassgtlefitegftwtgvtqnggsnackrgpgsgffsrlnwliksgstyp
vldvtmpnndnfdklyiwgihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpw
vrglssrisiywtivkpgdvlvinsngnliaprgyfkmrtgkssimrsdapidtciseci
tpdgsipndkpfqnvnkitygacpkyv