PDB entry 2vhf

View 2vhf on RCSB PDB site
Description: structure of the cyld usp domain
Deposited on 2007-11-21, released 2008-03-11
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.235
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ubiquitin carboxyl-terminal hydrolase cyld
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ubiquitin carboxyl-terminal hydrolase cyld
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vhfA (A:)
    gleimigkkkgiqghynscyldstlfclfafssvldtvllrpkekndveyysetqellrt
    eivnplriygyvcatkimklrkilekveaasgftseekdpeeflnilfhhilrvepllki
    rsagqkvqdcyfyqifmeknekvgvptiqqllewsfinsnlkfaeapscliiqmprfgkd
    fklfkkifpslelnitdlledtprqcricgglamyecrecyddpdisagkikqfcktcnt
    qvhlhpkrlnhkynpvslpkdlpdwdwrhgcipcqnmelfavlcietshyvafvkygkdd
    sawlffdsmadrdggqngfnipqvtpcpevgeylkmsledlhsldsrriqgcarrllcda
    ymcmyqsptmslyk
    

    Sequence, based on observed residues (ATOM records):
    >2vhfA (A:)
    gleimigkkkgiqghynscyldstlfclfafssvldtvllrpkekndveyysetqellrt
    eivnplriygyvcatkimklrkilekveekdpeeflnilfhhilrvepllkirsagqkvq
    dcyfyqifmeknvgvptiqqllewsfinsnlkfaeapscliiqmprfgkdfklfkkifps
    lelnitdlledtprqcricgglamyecrecyddpdisagkikqfcktcntqvhlhpkrln
    hkynpvslqnmelfavlcietshyvafvkygkddsawlffdsmagfnipqvtpcpevgey
    lkmsledlhsldsrriqgcarrllcdaymcmyqsptmslyk
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vhfB (B:)
    gleimigkkkgiqghynscyldstlfclfafssvldtvllrpkekndveyysetqellrt
    eivnplriygyvcatkimklrkilekveaasgftseekdpeeflnilfhhilrvepllki
    rsagqkvqdcyfyqifmeknekvgvptiqqllewsfinsnlkfaeapscliiqmprfgkd
    fklfkkifpslelnitdlledtprqcricgglamyecrecyddpdisagkikqfcktcnt
    qvhlhpkrlnhkynpvslpkdlpdwdwrhgcipcqnmelfavlcietshyvafvkygkdd
    sawlffdsmadrdggqngfnipqvtpcpevgeylkmsledlhsldsrriqgcarrllcda
    ymcmyqsptmslyk
    

    Sequence, based on observed residues (ATOM records):
    >2vhfB (B:)
    gleimigkkkgiqghynscyldstlfclfafssvldtvllrpkekndveyysetqellrt
    eivnplriygyvcatkimklrkilekveakdpeeflnilfhhilrvepllkirsagqkvq
    dcyfyqifptiqqllewsfinsnlkfaeapscliiqmprkkifpslelnitdlledtprq
    cricgglamyecrecyddpdisagkikqfcktcntqvhlhpkrlnhkynpvslpkdlpdw
    dwrhgcipcqnmelfavlcietshyvafvkygkddsawlffdsmadnipqvtpcpevgey
    lkmsledlhsldsarrllcdaymcmyqsptmsly