PDB entry 2vgr

View 2vgr on RCSB PDB site
Description: structure of the wt-phycoerythrobilin synthase pebs from the cyanophage p-ssm2 in complex with the bound substrate biliverdin ixa
Deposited on 2007-11-15, released 2008-08-05
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.23
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cyanobacterial phycoerythrobilin
    Species: PROCHLOROCOCCUS PHAGE P-SSM2 [TaxId:268746]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: cyanobacterial phycoerythrobilin
    Species: PROCHLOROCOCCUS PHAGE P-SSM2 [TaxId:268746]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: cyanobacterial phycoerythrobilin
    Species: PROCHLOROCOCCUS PHAGE P-SSM2 [TaxId:268746]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: cyanobacterial phycoerythrobilin
    Species: PROCHLOROCOCCUS PHAGE P-SSM2 [TaxId:268746]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: BLA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vgrA (A:)
mtknprnnkpkkildssyksktiwqnyidalfetfpqleisevwakwdggnvtkdggdak
ltanirtgehflkareahivdpnsdiyntilypktgadlpcfgmdlmkfsdkkviivfdf
qhprekylfsvdglpeddgkyrffemgnhfsknifvryckpdevdqyldtfklyltkyke
midnnkpvgedttvysdfdtymteldpvrgymknkfgegrseafvndflfsyk

    Sequence, based on observed residues (ATOM records):
    >2vgrA (A:)
ktiwqnyidalfetfpqleisevwakwdggnvggdakltanirtgehflkareahivdpn
sdiyntilypktgadlpcfgmdlmkfsdkkviivfdfqhprekylfsvdglpeddgkyrf
femgnhfsknifvryckpdevdqyldtfklyltkykemidnnkpvgedttvysdfdtymt
eldpvrgymknkfgegrseafvndflfsyk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vgrB (B:)
mtknprnnkpkkildssyksktiwqnyidalfetfpqleisevwakwdggnvtkdggdak
ltanirtgehflkareahivdpnsdiyntilypktgadlpcfgmdlmkfsdkkviivfdf
qhprekylfsvdglpeddgkyrffemgnhfsknifvryckpdevdqyldtfklyltkyke
midnnkpvgedttvysdfdtymteldpvrgymknkfgegrseafvndflfsyk

    Sequence, based on observed residues (ATOM records):
    >2vgrB (B:)
ktiwqnyidalfetfpqleisevwakwdggnvtkgdakltanirtgehflkareahivdp
nsdiyntilypktgadlpcfgmdlmkfsdkkviivfdfqhprekylfsvdglpeddgkyr
ffemgnhfsknifvryckpdevdqyldtfklyltkykemidnnkpvgedttvysdfdtym
teldpvrgymknkfgegrseafvndflfsyk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vgrC (C:)
mtknprnnkpkkildssyksktiwqnyidalfetfpqleisevwakwdggnvtkdggdak
ltanirtgehflkareahivdpnsdiyntilypktgadlpcfgmdlmkfsdkkviivfdf
qhprekylfsvdglpeddgkyrffemgnhfsknifvryckpdevdqyldtfklyltkyke
midnnkpvgedttvysdfdtymteldpvrgymknkfgegrseafvndflfsyk

    Sequence, based on observed residues (ATOM records):
    >2vgrC (C:)
ksktiwqnyidalfetfpqleisevwakwdggnvtggdakltanirtgehflkareahiv
dpnsdiyntilypktgadlpcfgmdlmkfsdkkviivfdfqhprekylfsvdglpeddgk
yrffemgnhfsknifvryckpdevdqyldtfklyltkykemidnnkpvgedttvysdfdt
ymteldpvrgymknkfgegrseafvndflfsyk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2vgrD (D:)
mtknprnnkpkkildssyksktiwqnyidalfetfpqleisevwakwdggnvtkdggdak
ltanirtgehflkareahivdpnsdiyntilypktgadlpcfgmdlmkfsdkkviivfdf
qhprekylfsvdglpeddgkyrffemgnhfsknifvryckpdevdqyldtfklyltkyke
midnnkpvgedttvysdfdtymteldpvrgymknkfgegrseafvndflfsyk

    Sequence, based on observed residues (ATOM records):
    >2vgrD (D:)
ktiwqnyidalfetfpqleisevwakwdggnvtkdggdakltanirtgehflkareahiv
dpnsdiyntilypktgadlpcfgmdlmkfsdkkviivfdfqhprekylfsvdglpeddgk
yrffemgnhfsknifvryckpdevdqyldtfklyltkykemidnnkpvgedttvysdfdt
ymteldpvrgymknkfgegrseafvndflfsyk