PDB entry 2vfp

View 2vfp on RCSB PDB site
Description: low temperature structure of p22 tailspike protein fragment (109-666), mutant v349l
Class: hydrolase
Keywords: p22 tailspike protein, salmonella bacteriophage p22, protein folding, protein stability, right-handed parallel beta-helix, hydrolase, late protein, endoglycosidase
Deposited on 2007-11-05, released 2008-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-12-16, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.125
AEROSPACI score: 0.66 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: p22 tailspike protein
    Species: ENTEROBACTERIA PHAGE P22 [TaxId:10754]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VFP
      • engineered mutation (241)
      • conflict see remark 9 (405)
    • Uniprot P12528 (Start-558)
    Domains in SCOPe 2.08: d2vfpa_
  • Heterogens: GOL, SO4, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vfpA (A:)
mdpdqysieadkkfkysvklsdyptlqdaasaavdgllidrdynfyggetvdfggkvlti
eckakfigdgnliftklgkgsriagvfmestttpwvikpwtddnqwltdaaavvatlkqs
ktdgyqptvsdyvkfpgietllppnakgqnitstleirecigvevhrasglmagflfrgc
hfckmvdannpsggkdgiitfenlsgdwgkgnyviggrtsygsvssaqflrnnggferdg
gligftsyragesgvktwqgtvgsttsrnynlqfrdsvviypvwdgfdlgadtdmnpeld
rpgdypitqyplhqlplnhlidnllvrgalgvgfgmdgkgmyvsnitvedcagsgayllt
hesvftniaiidtntkdfqanqiyisgacrvnglrligirstdgqsltidapnstvsgit
gmvdpsrinvanlaeeglgniransfgydsaaiklrihklsktldsgalyshinggagsg
saytqltaisgstpdavslkvnhkdcrgaeipfvpdiasddfikdsscflpywennstsl
kalvkkpngelvrltlatl

    Sequence, based on observed residues (ATOM records): (download) 
    >2vfpA (A:)
dqysieadkkfkysvklsdyptlqdaasaavdgllidrdynfyggetvdfggkvltieck
akfigdgnliftklgkgsriagvfmestttpwvikpwtddnqwltdaaavvatlkqsktd
gyqptvsdyvkfpgietllppnakgqnitstleirecigvevhrasglmagflfrgchfc
kmvdannpsggkdgiitfenlsgdwgkgnyviggrtsygsvssaqflrnnggferdggli
gftsyragesgvktwqgtvgsttsrnynlqfrdsvviypvwdgfdlgadtdmnpeldrpg
dypitqyplhqlplnhlidnllvrgalgvgfgmdgkgmyvsnitvedcagsgayllthes
vftniaiidtntkdfqanqiyisgacrvnglrligirstdgqsltidapnstvsgitgmv
dpsrinvanlaeeglgniransfgydsaaiklrihklsktldsgalyshinggagsgsay
tqltaisgstpdavslkvnhkdcrgaeipfvpdiasddfikdsscflpywennstslkal
vkkpngelvrltlatl