PDB entry 2vfm

View 2vfm on RCSB PDB site
Description: low temperature structure of p22 tailspike protein fragment (109-666)
Class: hydrolase
Keywords: p22 tailspike protein, salmonella bacteriophage p22, protein folding, protein stability, right-handed parallel beta-helix, hydrolase, late protein, endoglycosidase
Deposited on 2007-11-05, released 2008-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-12-16, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.136
AEROSPACI score: 0.67 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: bifunctional tail protein
    Species: ENTEROBACTERIA PHAGE P22 [TaxId:10754]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VFM
      • conflict (see remark (405)
    • Uniprot P12528 (Start-558)
    Domains in SCOPe 2.08: d2vfma_
  • Heterogens: GOL, SO4, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vfmA (A:)
mdpdqysieadkkfkysvklsdyptlqdaasaavdgllidrdynfyggetvdfggkvlti
eckakfigdgnliftklgkgsriagvfmestttpwvikpwtddnqwltdaaavvatlkqs
ktdgyqptvsdyvkfpgietllppnakgqnitstleirecigvevhrasglmagflfrgc
hfckmvdannpsggkdgiitfenlsgdwgkgnyviggrtsygsvssaqflrnnggferdg
gvigftsyragesgvktwqgtvgsttsrnynlqfrdsvviypvwdgfdlgadtdmnpeld
rpgdypitqyplhqlplnhlidnllvrgalgvgfgmdgkgmyvsnitvedcagsgayllt
hesvftniaiidtntkdfqanqiyisgacrvnglrligirstdgqsltidapnstvsgit
gmvdpsrinvanlaeeglgniransfgydsaaiklrihklsktldsgalyshinggagsg
saytqltaisgstpdavslkvnhkdcrgaeipfvpdiasddfikdsscflpywennstsl
kalvkkpngelvrltlatl

    Sequence, based on observed residues (ATOM records): (download) 
    >2vfmA (A:)
qysieadkkfkysvklsdyptlqdaasaavdgllidrdynfyggetvdfggkvltiecka
kfigdgnliftklgkgsriagvfmestttpwvikpwtddnqwltdaaavvatlkqsktdg
yqptvsdyvkfpgietllppnakgqnitstleirecigvevhrasglmagflfrgchfck
mvdannpsggkdgiitfenlsgdwgkgnyviggrtsygsvssaqflrnnggferdggvig
ftsyragesgvktwqgtvgsttsrnynlqfrdsvviypvwdgfdlgadtdmnpeldrpgd
ypitqyplhqlplnhlidnllvrgalgvgfgmdgkgmyvsnitvedcagsgayllthesv
ftniaiidtntkdfqanqiyisgacrvnglrligirstdgqsltidapnstvsgitgmvd
psrinvanlaeeglgniransfgydsaaiklrihklsktldsgalyshinggagsgsayt
qltaisgstpdavslkvnhkdcrgaeipfvpdiasddfikdsscflpywennstslkalv
kkpngelvrltlatl