PDB entry 2vfi
View 2vfi on RCSB PDB site
Description: crystal structure of the plasmodium falciparum triosephosphate isomerase in the loop closed state with 3-phosphoglycerate bound at the active site and interface
Class: isomerase
Keywords: plasmodium falciparum, fatty acid biosynthesis, triosephosphate isomerase, tim, mutant, isomerase, glycolysis, loop closed, pentose shunt, gluconeogenesis, lipid synthesis
Deposited on
2007-11-04, released
2008-12-09
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-08-04, with a file datestamp of
2009-07-31.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.21167
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: triosephosphate isomerase
Species: PLASMODIUM FALCIPARUM [TaxId:5833]
Database cross-references and differences (RAF-indexed):
- Uniprot Q07412 (Start-247)
- engineered mutation (162)
Domains in SCOPe 2.08: d2vfia_ - Chain 'B':
Compound: triosephosphate isomerase
Species: PLASMODIUM FALCIPARUM [TaxId:5833]
Database cross-references and differences (RAF-indexed):
- Uniprot Q07412 (Start-247)
- engineered mutation (162)
Domains in SCOPe 2.08: d2vfib_ - Heterogens: 3PG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vfiA (A:)
markyfvaanwkcngtlesiksltnsfnnldfdpskldvvvfpvsvhydhtrkllqskfs
tgiqnvskfgngsytgevsaeiakdlnieyviighferrkyfhetdedvreklqaslknn
lkavvcfgesleqreqnktievitkqvkafvdlidnfdnvilvyeplwaigtgktatpeq
aqlvhkeirkivkdtcgekqanqirilyggsvntencssliqqedidgflvgnaslkesf
vdiiksam
Sequence, based on observed residues (ATOM records): (download)
>2vfiA (A:)
rkyfvaanwkcngtlesiksltnsfnnldfdpskldvvvfpvsvhydhtrkllqskfstg
iqnvskfgngsytgevsaeiakdlnieyviighferrkyfhetdedvreklqaslknnlk
avvcfgesleqreqnktievitkqvkafvdlidnfdnvilvyeplwaigtgktatpeqaq
lvhkeirkivkdtcgekqanqirilyggsvntencssliqqedidgflvgnaslkesfvd
iiksam
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vfiB (B:)
markyfvaanwkcngtlesiksltnsfnnldfdpskldvvvfpvsvhydhtrkllqskfs
tgiqnvskfgngsytgevsaeiakdlnieyviighferrkyfhetdedvreklqaslknn
lkavvcfgesleqreqnktievitkqvkafvdlidnfdnvilvyeplwaigtgktatpeq
aqlvhkeirkivkdtcgekqanqirilyggsvntencssliqqedidgflvgnaslkesf
vdiiksam
Sequence, based on observed residues (ATOM records): (download)
>2vfiB (B:)
rkyfvaanwkcngtlesiksltnsfnnldfdpskldvvvfpvsvhydhtrkllqskfstg
iqnvskfgngsytgevsaeiakdlnieyviighferrkyfhetdedvreklqaslknnlk
avvcfgesleqreqnktievitkqvkafvdlidnfdnvilvyeplwaigtgktatpeqaq
lvhkeirkivkdtcgekqanqirilyggsvntencssliqqedidgflvgnaslkesfvd
iiksam