PDB entry 2vf7

View 2vf7 on RCSB PDB site
Description: crystal structure of uvra2 from deinococcus radiodurans
Deposited on 2007-10-31, released 2008-12-16
The last revision was dated 2018-06-06, with a file datestamp of 2018-06-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: excinuclease abc, subunit a.
    Species: Deinococcus radiodurans [TaxId:1299]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RYW8 (Start-841)
      • engineered mutation (745)
  • Chain 'B':
    Compound: excinuclease abc, subunit a.
    Species: Deinococcus radiodurans [TaxId:1299]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RYW8 (Start-841)
      • engineered mutation (745)
  • Chain 'C':
    Compound: excinuclease abc, subunit a.
    Species: Deinococcus radiodurans [TaxId:1299]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RYW8 (Start-841)
      • engineered mutation (745)
  • Heterogens: ADP, ZN, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vf7A (A:)
mtpsrpspdfpdggfvqvrgarqhnlkdisvkvprdalvvftgvsgsgksslafgtlyae
aqrrylesvspyarrlfnqagvpdvdaidglppavalqqargtptarssvgsvttlsnll
rmlysragdyppgqgivyaegfspntpegacpechglgrvytvtedsmvpdpsltirera
vaawpqawggqnqrdilvtlgidvdvpwrelpeetrhwilftdeqpvvpvypgltpaetq
ralkkkmepsymgtfssarrhvlhtfantesasmkkrvqgymiseecplchgkrlrqeal
nvtfaglditelsrlplarvsellrpyaeerepghaervknrpeqaialqrmaadlvkrl
dvllhlglgylgldrstptlspgelqrlrlatqlysnlfgvvyvldepsaglhpadteal
lsalenlkrggnslfvvehdldvirradwlvdvgpeagekggeilysgppeglkhvpesq
tgqylfadrhtephtprepagwlelngvtrnnldnldvrfplgvmtsvtgvsgsgkstlv
sqalvdalaahfgqpvnpdpeddedpadhtagsarlggdlaqitrlvrvdqkpigrtprs
nmatytglfdqvrklfaatplakkrgynagrfsfnvkggrcehcqgegwvmvellflpsv
yapcpvchgtrynaetleveyrgkniadvlaltvdeahdffadesaifraldtlrevglg
ylrlgqpatelsggeaqriklatelrrsgrggtvyvldepttglhpadverlqrqlvklv
dagntviavehkmqvvaasdwvldigpgagedggrlvaqgtpaevaqaagsvtapylraa
lr

    Sequence, based on observed residues (ATOM records):
    >2vf7A (A:)
pdggfvqvrgarqhnlkdisvkvprdalvvftgvsgsgksslafgtlyaeaqrrylesvs
pyarrlfnqagvpdvdaidglppavalqqargtptarssvgsvttlsnllrmlysragdy
ppgqgivyaegfspntpegacpechglgrvytvtedsmvpdpsltireravaawpqawgg
qnqrdilvtlgidvdvpwrelpeetrhwilftdeqpvvpvypgltpaetqralkkkmeps
ymgtfssarrhvlhtfantesasmkkrvqgymiseecplchgkrlrqealnvtfagldit
elsrlplarvsellrpyaeerepghaervknrpeqaialqrmaadlvkrldvllhlglgy
lgldrstptlspgelqrlrlatqlysnlfgvvyvldepsaglhpadteallsalenlkrg
gnslfvvehdldvirradwlvdvgpeagekggeilysgppeglkhvpesqtgqylfadrh
tephtprepagwlelngvtrnnldnldvrfplgvmtsvtgvsgsgkstlvsqalvdalaa
hfgqgsarlggdlaqitrlvrvdqkpigrtprsnmatytglfdqvrklfaatplakkrgy
nagrfsfnvkggrcehcqgegwvmvellflpsvyapcpvchgtrynaetleveyrgknia
dvlaltvdeahdffadesaifraldtlrevglgylrlgqpatelsggeaqriklatelrr
sgrggtvyvldepttglhpadverlqrqlvklvdagntviavehkmqvvaasdwvldigp
gagedggrlvaqgtpaevaqaagsvtapylraalr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vf7B (B:)
mtpsrpspdfpdggfvqvrgarqhnlkdisvkvprdalvvftgvsgsgksslafgtlyae
aqrrylesvspyarrlfnqagvpdvdaidglppavalqqargtptarssvgsvttlsnll
rmlysragdyppgqgivyaegfspntpegacpechglgrvytvtedsmvpdpsltirera
vaawpqawggqnqrdilvtlgidvdvpwrelpeetrhwilftdeqpvvpvypgltpaetq
ralkkkmepsymgtfssarrhvlhtfantesasmkkrvqgymiseecplchgkrlrqeal
nvtfaglditelsrlplarvsellrpyaeerepghaervknrpeqaialqrmaadlvkrl
dvllhlglgylgldrstptlspgelqrlrlatqlysnlfgvvyvldepsaglhpadteal
lsalenlkrggnslfvvehdldvirradwlvdvgpeagekggeilysgppeglkhvpesq
tgqylfadrhtephtprepagwlelngvtrnnldnldvrfplgvmtsvtgvsgsgkstlv
sqalvdalaahfgqpvnpdpeddedpadhtagsarlggdlaqitrlvrvdqkpigrtprs
nmatytglfdqvrklfaatplakkrgynagrfsfnvkggrcehcqgegwvmvellflpsv
yapcpvchgtrynaetleveyrgkniadvlaltvdeahdffadesaifraldtlrevglg
ylrlgqpatelsggeaqriklatelrrsgrggtvyvldepttglhpadverlqrqlvklv
dagntviavehkmqvvaasdwvldigpgagedggrlvaqgtpaevaqaagsvtapylraa
lr

    Sequence, based on observed residues (ATOM records):
    >2vf7B (B:)
pdfpdggfvqvrgarqhnlkdisvkvprdalvvftgvsgsgksslafgtlyaeaqrryle
svspyarrlfnqagvpdvdaidglppavalqqargtptarssvgsvttlsnllrmlysra
gdyppgqgivyaegfspntpegacpechglgrvytvtedsmvpdpsltireravaawpqa
wggqnqrdilvtlgidvdvpwrelpeetrhwilftdeqpvvpvypgltpaetqralkkkm
epsymgtfssarrhvlhtfantesasmkkrvqgymiseecplchgkrlrqealnvtfagl
ditelsrlplarvsellrpyaeerepghaervknrpeqaialqrmaadlvkrldvllhlg
lgylgldrstptlspgelqrlrlatqlysnlfgvvyvldepsaglhpadteallsalenl
krggnslfvvehdldvirradwlvdvgpeagekggeilysgppeglkhvpesqtgqylfa
drhtephtprepagwlelngvtrnnldnldvrfplgvmtsvtgvsgsgkstlvsqalvda
laahfgqgsarlggdlaqitrlvrvdqkpigrtprsnmatytglfdqvrklfaatplakk
rgynagrfsfnvkggrcehcqgegwvmvpsvyapcpvchgtrynaetleveyrgkniadv
laltvdeahdffadesaifraldtlrevglgylrlgqpatelsggeaqriklatelrrsg
rggtvyvldepttglhpadverlqrqlvklvdagntviavehkmqvvaasdwvldigpga
gedggrlvaqgtpaevaqaagsvtapylraalr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vf7C (C:)
mtpsrpspdfpdggfvqvrgarqhnlkdisvkvprdalvvftgvsgsgksslafgtlyae
aqrrylesvspyarrlfnqagvpdvdaidglppavalqqargtptarssvgsvttlsnll
rmlysragdyppgqgivyaegfspntpegacpechglgrvytvtedsmvpdpsltirera
vaawpqawggqnqrdilvtlgidvdvpwrelpeetrhwilftdeqpvvpvypgltpaetq
ralkkkmepsymgtfssarrhvlhtfantesasmkkrvqgymiseecplchgkrlrqeal
nvtfaglditelsrlplarvsellrpyaeerepghaervknrpeqaialqrmaadlvkrl
dvllhlglgylgldrstptlspgelqrlrlatqlysnlfgvvyvldepsaglhpadteal
lsalenlkrggnslfvvehdldvirradwlvdvgpeagekggeilysgppeglkhvpesq
tgqylfadrhtephtprepagwlelngvtrnnldnldvrfplgvmtsvtgvsgsgkstlv
sqalvdalaahfgqpvnpdpeddedpadhtagsarlggdlaqitrlvrvdqkpigrtprs
nmatytglfdqvrklfaatplakkrgynagrfsfnvkggrcehcqgegwvmvellflpsv
yapcpvchgtrynaetleveyrgkniadvlaltvdeahdffadesaifraldtlrevglg
ylrlgqpatelsggeaqriklatelrrsgrggtvyvldepttglhpadverlqrqlvklv
dagntviavehkmqvvaasdwvldigpgagedggrlvaqgtpaevaqaagsvtapylraa
lr

    Sequence, based on observed residues (ATOM records):
    >2vf7C (C:)
fpdggfvqvrgarqhnlkdisvkvprdalvvftgvsgsgksslafgtlyaeaqrrylesv
spyarrlfnqagvpdvdaidglppavalqqargtptarssvgsvttlsnllrmlysragd
yppgqgivyaegfspntpegacpechglgrvytvtedsmvpdpsltireravaawpqawg
gqnqrdilvtlgidvdvpwrelpeetrhwilftdeqpvvpvypgltpaetqralkkkmep
symgtfssarrhvlhtfantesasmkkrvqgymiseecplchgkrlrqealnvtfagldi
telsrlplarvsellrpyaeerepghaervknrpeqaialqrmaadlvkrldvllhlglg
ylgldrstptlspgelqrlrlatqlysnlfgvvyvldepsaglhpadteallsalenlkr
ggnslfvvehdldvirradwlvdvgpeagekggeilysgppeglkhvpesqtgqylfadr
htephtprepagwlelngvtrnnldnldvrfplgvmtsvtgvsgsgkstlvsqalvdala
ahfgsarlggdlaqitrlvrvdqkpigrtprsnmatytglfdqvrklfaatplakkrgyn
agrfsfnvkggrcehcqgegwvmvellflpsvyapcpvchgtrynaetleveyrgkniad
vlaltvdeahdffadesaifraldtlrevglgylrlgqpatelsggeaqriklatelrrs
grggtvyvldepttglhpadverlqrqlvklvdagntviavehkmqvvaasdwvldigpg
agedggrlvaqgtpaevaqaagsvtapylraalr