PDB entry 2ven
View 2ven on RCSB PDB site
Description: structure-based enzyme engineering efforts with an inactive monomeric tim variant: the importance of a single point mutation for generating an active site with suitable binding properties
Class: isomerase
Keywords: isomerase, tim barrel, glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis, glycosome
Deposited on
2007-10-25, released
2008-02-19
The last revision prior to the SCOPe 2.01 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-31.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.188
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: glycosomal triosephosphate isomerase
Species: Trypanosoma brucei brucei [TaxId:5702]
Database cross-references and differences (RAF-indexed):
- Uniprot P04789 (0-237)
- conflict (71-72)
- conflict (90)
- engineered mutation (223)
Domains in SCOPe 2.01: d2vena_ - Chain 'B':
Compound: glycosomal triosephosphate isomerase
Species: Trypanosoma brucei brucei [TaxId:5702]
Database cross-references and differences (RAF-indexed):
- Uniprot P04789 (0-237)
- conflict (12)
- conflict (71-72)
- conflict (90)
- engineered mutation (223)
Domains in SCOPe 2.01: d2venb_ - Heterogens: CIT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2venA (A:)
skpqpiaaanwksgspdslselidlfnstsinhdvqcvvastfvhlamtkerlshpkfvi
aaqnagnadalaslkdfgvnwivlghserrwyygetneivadkvaaavasgfmviacige
tlqeresgrtavvvltqiaaiakklkkadwakvviayepvwaigtgkvatpqqaqeahal
irswvsskigadvagelrilyggsvngknartlyqqrdvngflaglkpefvdiikatq
Sequence, based on observed residues (ATOM records): (download)
>2venA (A:)
skpqpiaaanwkslselidlfnstsinhdvqcvvastfvhlamtkerlshpkfviaaqna
gnadalaslkdfgvnwivlghserrwyygetneivadkvaaavasgfmviacigetlqer
esgrtavvvltqiaaiakklkkadwakvviayepvwkvatpqqaqeahalirswvsskig
advagelrilyggsvngknartlyqqrdvngflaglkpefvdiikatq
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2venB (B:)
skpqpiaaanwksgspdslselidlfnstsinhdvqcvvastfvhlamtkerlshpkfvi
aaqnagnadalaslkdfgvnwivlghserrwyygetneivadkvaaavasgfmviacige
tlqeresgrtavvvltqiaaiakklkkadwakvviayepvwaigtgkvatpqqaqeahal
irswvsskigadvagelrilyggsvngknartlyqqrdvngflaglkpefvdiikatq