PDB entry 2vd9

View 2vd9 on RCSB PDB site
Description: The crystal structure of alanine racemase from Bacillus anthracis (BA0252) with bound L-Ala-P
Deposited on 2007-10-01, released 2008-05-20
The last revision was dated 2012-02-08, with a file datestamp of 2012-02-03.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.19
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alanine racemase
    Species: BACILLUS ANTHRACIS [TaxId:198094]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VD9
    • Uniprot Q81VF6 (Start-390)
  • Chain 'B':
    Compound: alanine racemase
    Species: BACILLUS ANTHRACIS [TaxId:198094]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VD9
    • Uniprot Q81VF6 (Start-390)
  • Heterogens: MG, CL, IN5, EPC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vd9A (A:)
gpmeeapfyrdtwvevdldaiynnvthikefipsdveifavvkgnayghdyvpvakiale
agatrlavafldealvlrragitapilvlgpspprdinvaaendvaltvfqkewvdeaik
lwdgsstmkyhinfdsgmgrigirerkelkgflkslegapflelegvythfatadevets
yfdkqyntfleqlswlkefgvdpkfvhtansaatlrfqgitfnavrigiamyglspsvei
rpflpfklepalslhtkvahikqvikgdgisynvtyrtkteewiatvaigyadgwlrrlq
gfevlvngkrvpivgrvtmdqfmihlpcevplgtkvtligrqgdeyisatevaeysgtin
yeiittisfrvprifirngkvvevinylndi

    Sequence, based on observed residues (ATOM records):
    >2vd9A (A:)
apfyrdtwvevdldaiynnvthikefipsdveifavvkgnayghdyvpvakialeagatr
lavafldealvlrragitapilvlgpspprdinvaaendvaltvfqkewvdeaiklwdgs
stmkyhinfdsgmgrigirerkelkgflkslegapflelegvythfatadevetsyfdkq
yntfleqlswlkefgvdpkfvhtansaatlrfqgitfnavrigiamyglspsveirpflp
fklepalslhtkvahikqvikgdgisynvtyrtkteewiatvaigyadgwlrrlqgfevl
vngkrvpivgrvtmdqfmihlpcevplgtkvtligrqgdeyisatevaeysgtinyeiit
tisfrvprifirngkvvevinylndi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vd9B (B:)
gpmeeapfyrdtwvevdldaiynnvthikefipsdveifavvkgnayghdyvpvakiale
agatrlavafldealvlrragitapilvlgpspprdinvaaendvaltvfqkewvdeaik
lwdgsstmkyhinfdsgmgrigirerkelkgflkslegapflelegvythfatadevets
yfdkqyntfleqlswlkefgvdpkfvhtansaatlrfqgitfnavrigiamyglspsvei
rpflpfklepalslhtkvahikqvikgdgisynvtyrtkteewiatvaigyadgwlrrlq
gfevlvngkrvpivgrvtmdqfmihlpcevplgtkvtligrqgdeyisatevaeysgtin
yeiittisfrvprifirngkvvevinylndi

    Sequence, based on observed residues (ATOM records):
    >2vd9B (B:)
apfyrdtwvevdldaiynnvthikefipsdveifavvkgnayghdyvpvakialeagatr
lavafldealvlrragitapilvlgpspprdinvaaendvaltvfqkewvdeaiklwdgs
stmkyhinfdsgmgrigirerkelkgflkslegapflelegvythfatadevetsyfdkq
yntfleqlswlkefgvdpkfvhtansaatlrfqgitfnavrigiamyglspsveirpflp
fklepalslhtkvahikqvikgdgisynvtyrtkteewiatvaigyadgwlrrlqgfevl
vngkrvpivgrvtmdqfmihlpcevplgtkvtligrqgdeyisatevaeysgtinyeiit
tisfrvprifirngkvvevinylndi