PDB entry 2vbf

View 2vbf on RCSB PDB site
Description: the holostructure of the branched-chain keto acid decarboxylase (kdca) from lactococcus lactis
Deposited on 2007-09-12, released 2007-11-27
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.165
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: branched-chain alpha-ketoacid decarboxylase
    Species: LACTOCOCCUS LACTIS [TaxId:1358]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VBF
    • Uniprot Q6QBS4 (23-569)
  • Chain 'B':
    Compound: branched-chain alpha-ketoacid decarboxylase
    Species: LACTOCOCCUS LACTIS [TaxId:1358]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VBF
    • Uniprot Q6QBS4 (23-569)
  • Heterogens: MG, TPP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vbfA (A:)
    mgsshhhhhhssglvprgshmasmytvgdylldrlhelgieeifgvpgdynlqfldqiis
    redmkwignanelnasymadgyartkkaaaflttfgvgelsainglagsyaenlpvveiv
    gsptskvqndgkfvhhtladgdfkhfmkmhepvtaartlltaenatyeidrvlsqllker
    kpvyinlpvdvaaakaekpalslekessttntteqvilskieeslknaqkpvviaghevi
    sfglektvtqfvsetklpittlnfgksavdeslpsflgiyngklseislknfvesadfil
    mlgvkltdsstgafthhldenkmislnidegiifnkvvedfdfravvsslselkgieyeg
    qyidkqyeefipssaplsqdrlwqavesltqsnetivaeqgtsffgastiflksnsrfig
    qplwgsigytfpaalgsqiadkesrhllfigdgslqltvqelglsireklnpicfiinnd
    gytvereihgptqsyndipmwnysklpetfgatedrvvskivrtenefvsvmkeaqadvn
    rmywielvlekedapkllkkmgklfaeqnk
    

    Sequence, based on observed residues (ATOM records):
    >2vbfA (A:)
    hssglmytvgdylldrlhelgieeifgvpgdynlqfldqiisredmkwignanelnasym
    adgyartkkaaaflttfgvgelsainglagsyaenlpvveivgsptskvqndgkfvhhtl
    adgdfkhfmkmhepvtaartlltaenatyeidrvlsqllkerkpvyinlpvdvaaakaek
    palslentteqvilskieeslknaqkpvviaghevisfglektvtqfvsetklpittlnf
    gksavdeslpsflgiyngklseislknfvesadfilmlgvkltdsstgafthhldenkmi
    slnidegiifnkvvedfdfravvsslselkgieyegqyidkqyeefipssaplsqdrlwq
    avesltqsnetivaeqgtsffgastiflksnsrfigqplwgsigytfpaalgsqiadkes
    rhllfigdgslqltvqelglsireklnpicfiinndgytvereihgptqsyndipmwnys
    klpetfgatedrvvskivrtenefvsvmkeaqadvnrmywielvlekedapkllkkmgkl
    faeqnk
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vbfB (B:)
    mgsshhhhhhssglvprgshmasmytvgdylldrlhelgieeifgvpgdynlqfldqiis
    redmkwignanelnasymadgyartkkaaaflttfgvgelsainglagsyaenlpvveiv
    gsptskvqndgkfvhhtladgdfkhfmkmhepvtaartlltaenatyeidrvlsqllker
    kpvyinlpvdvaaakaekpalslekessttntteqvilskieeslknaqkpvviaghevi
    sfglektvtqfvsetklpittlnfgksavdeslpsflgiyngklseislknfvesadfil
    mlgvkltdsstgafthhldenkmislnidegiifnkvvedfdfravvsslselkgieyeg
    qyidkqyeefipssaplsqdrlwqavesltqsnetivaeqgtsffgastiflksnsrfig
    qplwgsigytfpaalgsqiadkesrhllfigdgslqltvqelglsireklnpicfiinnd
    gytvereihgptqsyndipmwnysklpetfgatedrvvskivrtenefvsvmkeaqadvn
    rmywielvlekedapkllkkmgklfaeqnk
    

    Sequence, based on observed residues (ATOM records):
    >2vbfB (B:)
    hssglmytvgdylldrlhelgieeifgvpgdynlqfldqiisredmkwignanelnasym
    adgyartkkaaaflttfgvgelsainglagsyaenlpvveivgsptskvqndgkfvhhtl
    adgdfkhfmkmhepvtaartlltaenatyeidrvlsqllkerkpvyinlpvdvaaakaek
    palslentteqvilskieeslknaqkpvviaghevisfglektvtqfvsetklpittlnf
    gksavdeslpsflgiyngklseislknfvesadfilmlgvkltdsstgafthhldenkmi
    slnidegiifnkvvedfdfravvsslselkgieyegqyidkqyeefipssaplsqdrlwq
    avesltqsnetivaeqgtsffgastiflksnsrfigqplwgsigytfpaalgsqiadkes
    rhllfigdgslqltvqelglsireklnpicfiinndgytvereihgptqsyndipmwnys
    klpetfgatedrvvskivrtenefvsvmkeaqadvnrmywielvlekedapkllkkmgkl
    faeqnk