PDB entry 2vbd
View 2vbd on RCSB PDB site
Description: Isopenicillin N synthase with substrate analogue L,L,L-ACOMP (unexposed)
Class: oxidoreductase
Keywords: antibiotic biosynthesis, penicillin biosynthesis, iron, oxygenase, vitamin c, metal-binding, monocyclic intermediate, oxidoreductase, b-lactam antibiotic
Deposited on
2007-09-10, released
2008-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated
2013-01-30, with a file datestamp of
2013-01-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.169
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: isopenicillin n synthetase
Species: Emericella nidulans [TaxId:162425]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vbda_ - Heterogens: FE2, V10, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vbdA (A:)
mgsvskanvpkidvsplfgddqaakmrvaqqidaasrdtgffyavnhginvqrlsqktke
fhmsitpeekwdlairaynkehqdqvragyylsipgkkavesfcylnpnftpdhpriqak
tpthevnvwpdetkhpgfqdfaeqyywdvfglssallkgyalalgkeenffarhfkpddt
lasvvlirypyldpypeaaiktaadgtklsfewhedvslitvlyqsnvqnlqvetaagyq
dieaddtgylincgsymahltnnyykapihrvkwvnaerqslpffvnlgydsvidpfdpr
epngksdreplsygdylqnglvslinkngqt
Sequence, based on observed residues (ATOM records): (download)
>2vbdA (A:)
svskanvpkidvsplfgddqaakmrvaqqidaasrdtgffyavnhginvqrlsqktkefh
msitpeekwdlairaynkehqdqvragyylsipgkkavesfcylnpnftpdhpriqaktp
thevnvwpdetkhpgfqdfaeqyywdvfglssallkgyalalgkeenffarhfkpddtla
svvlirypyldpypeaaiktaadgtklsfewhedvslitvlyqsnvqnlqvetaagyqdi
eaddtgylincgsymahltnnyykapihrvkwvnaerqslpffvnlgydsvidpfdprep
ngksdreplsygdylqnglvslinkngqt