PDB entry 2v9x

View 2v9x on RCSB PDB site
Description: e138d variant of escherichia coli dctp deaminase in complex with dutp
Class: hydrolase
Keywords: dutpase, hydrolase, dctp deaminase, nucleotide metabolism
Deposited on 2007-08-28, released 2007-11-20
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.205
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xa_
  • Chain 'B':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xb_
  • Chain 'C':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xc_
  • Chain 'D':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xd_
  • Chain 'E':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xe_
  • Chain 'F':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xf_
  • Chain 'G':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xg_
  • Chain 'H':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xh_
  • Chain 'I':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xi_
  • Chain 'J':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-End)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xj_
  • Chain 'K':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-192)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xk_
  • Chain 'L':
    Compound: deoxycytidine triphosphate deaminase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28248 (0-End)
      • engineered mutation (137)
    Domains in SCOPe 2.01: d2v9xl_
  • Heterogens: DUT, MG, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xA (A:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xB (B:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xC (C:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xD (D:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xE (E:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xF (F:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xG (G:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xH (H:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xI (I:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >2v9xJ (J:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

    Sequence, based on observed residues (ATOM records): (download) 
    >2v9xJ (J:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlldrvms
deivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmvhvtahridpg
wsgcivldfynsgklplalrpgmligalsfeplsgpavrpy

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9xK (K:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >2v9xL (L:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrredakyr
nqqgavasridkd

    Sequence, based on observed residues (ATOM records): (download) 
    >2v9xL (L:)
mrlcdrdieawldegrlsinprppveringatvdvrlgnkfrtfrghtaafidlsgpkde
vsaaldrvmsdeivldegeafylhpgelalavtlesvtlpadlvgwldgrsslarlglmv
hvtahridpgwsgcivldfynsgklplalrpgmligalsfeplsgpavrpynrr