PDB entry 2v9o

View 2v9o on RCSB PDB site
Description: l-rhamnulose-1-phosphate aldolase from escherichia coli (mutant a87m- t109f-e192a)
Class: lyase
Keywords: entropy index, metal-binding, oligomerization, lyase, aldolase, class II, cleavage of l-rhamnulose-1-phosphate to dihydroxyacetoneph bacterial l-rhamnose metabolism, interface design, surface mutation, 2-ketose degradation, protein-protein interface, rare sugar, aggregation, zinc enzyme, fibrillation, rhamnose metabolism, protein engineering
Deposited on 2007-08-24, released 2008-01-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rhamnulose-1-phosphate aldolase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P32169 (0-273)
      • engineered mutation (86)
      • engineered mutation (108)
      • engineered mutation (191)
    Domains in SCOPe 2.08: d2v9oa_
  • Chain 'E':
    Compound: rhamnulose-1-phosphate aldolase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P32169 (Start-273)
      • engineered mutation (86)
      • engineered mutation (108)
      • engineered mutation (191)
    Domains in SCOPe 2.08: d2v9oe_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2v9oA (A:)
mqnitqswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsq
pmpllantpfivtgsgkffrnvqldpmanlgivkvdsdgagyhilwglfneavptselpa
hflshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgv
gilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvk
vysmggmkqtisreelialgkrfgvtplasalal

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2v9oE (E:)
mqnitqswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsq
pmpllantpfivtgsgkffrnvqldpmanlgivkvdsdgagyhilwglfneavptselpa
hflshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgv
gilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvk
vysmggmkqtisreelialgkrfgvtplasalal

    Sequence, based on observed residues (ATOM records): (download) 
    >2v9oE (E:)
qnitqswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsqp
mpllantpfivtgsgkffrnvqldpmanlgivkvdsdgagyhilwglfneavptselpah
flshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgvg
ilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvkv
ysmggmkqtisreelialgkrfgvtplasalal