PDB entry 2v9g
View 2v9g on RCSB PDB site
Description: l-rhamnulose-1-phosphate aldolase from escherichia coli (mutant q6y- l84w-e192a)
Class: lyase
Keywords: zinc, lyase, aldolase, class II, cytoplasm, protein engineering, 2-ketose degradation, cleavage of l-rhamnulose-1-phosphate to dihydroxyacetoneph bacterial l-rhamnose metabolism, metal-binding, oligomerization, interface design, protein-protein interface, rare sugar, aggregation, zinc enzyme, fibrillation, surface mutation, rhamnose metabolism
Deposited on
2007-08-23, released
2008-01-22
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-07-24, with a file datestamp of
2019-07-19.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: rhamnulose-1-phosphate aldolase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32169 (Start-273)
- engineered mutation (5)
- engineered mutation (83)
- engineered mutation (191)
Domains in SCOPe 2.08: d2v9ga_ - Chain 'B':
Compound: rhamnulose-1-phosphate aldolase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32169 (0-273)
- engineered mutation (5)
- engineered mutation (83)
- engineered mutation (191)
Domains in SCOPe 2.08: d2v9gb_ - Chain 'C':
Compound: rhamnulose-1-phosphate aldolase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32169 (0-273)
- engineered mutation (5)
- engineered mutation (83)
- engineered mutation (191)
Domains in SCOPe 2.08: d2v9gc_ - Chain 'D':
Compound: rhamnulose-1-phosphate aldolase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32169 (0-273)
- engineered mutation (5)
- engineered mutation (83)
- engineered mutation (191)
Domains in SCOPe 2.08: d2v9gd_ - Heterogens: TLA, ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2v9gA (A:)
mqnityswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsq
pmpllantpfivtgsgkffrnvqwdpaanlgivkvdsdgagyhilwgltneavptselpa
hflshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgv
gilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvk
vysmggmkqtisreelialgkrfgvtplasalal
Sequence, based on observed residues (ATOM records): (download)
>2v9gA (A:)
qnityswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsqp
mpllantpfivtgsgkffrnvqwdpaanlgivkvdsdgagyhilwgltneavptselpah
flshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgvg
ilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvkv
ysmggmkqtisreelialgkrfgvtplasalal
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2v9gB (B:)
mqnityswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsq
pmpllantpfivtgsgkffrnvqwdpaanlgivkvdsdgagyhilwgltneavptselpa
hflshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgv
gilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvk
vysmggmkqtisreelialgkrfgvtplasalal
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2v9gC (C:)
mqnityswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsq
pmpllantpfivtgsgkffrnvqwdpaanlgivkvdsdgagyhilwgltneavptselpa
hflshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgv
gilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvk
vysmggmkqtisreelialgkrfgvtplasalal
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2v9gD (D:)
mqnityswfvqgmikattdawlkgwdernggnltlrlddadiapyhdnfhqqpryiplsq
pmpllantpfivtgsgkffrnvqwdpaanlgivkvdsdgagyhilwgltneavptselpa
hflshcerikatngkdrvimhchatnlialtyvlendtavftrqlwegsteclvvfpdgv
gilpwmvpgtdaigqataqemqkhslvlwpfhgvfgsgptldetfglidtaeksaqvlvk
vysmggmkqtisreelialgkrfgvtplasalal