PDB entry 2v8y
View 2v8y on RCSB PDB site
Description: crystallographic and mass spectrometric characterisation of eif4e with n7-cap derivatives
Class: translation
Keywords: translation, phosphorylation, initiation factor, cap, eif4e, 7bngmp, 4e-bp1, RNA-binding, acetylation, host-virus interaction, protein synthesis inhibitor, protein biosynthesis, translation regulation
Deposited on
2007-08-16, released
2007-08-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.206
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: eukaryotic translation initiation factor 4e
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v8ya1 - Chain 'B':
Compound: eukaryotic translation initiation factor 4e-binding protein 1
Species: HOMO SAPIENS, synthetic [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: eukaryotic translation initiation factor 4e
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v8ye1 - Chain 'F':
Compound: eukaryotic translation initiation factor 4e-binding protein 1
Species: HOMO SAPIENS, synthetic [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: MGV, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2v8yA (A:)
matvepettptpnpptteeektesnqevanpehyikhplqnrwalwffkndksktwqanl
rliskfdtvedfwalynhiqlssnlmpgcdyslfkdgiepmwedeknkrggrwlitlnkq
qrrsdldrfwletllcligesfddysddvcgavvnvrakgdkiaiwttecenreavthig
rvykerlglppkivigyqshadtatksgsttknrfvv
Sequence, based on observed residues (ATOM records): (download)
>2v8yA (A:)
ehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcdy
slfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcg
avvnvrakgdkiaiwttecenreavthigrvykerlglppkivigyqshadtattknrfv
v
- Chain 'B':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2v8yE (E:)
matvepettptpnpptteeektesnqevanpehyikhplqnrwalwffkndksktwqanl
rliskfdtvedfwalynhiqlssnlmpgcdyslfkdgiepmwedeknkrggrwlitlnkq
qrrsdldrfwletllcligesfddysddvcgavvnvrakgdkiaiwttecenreavthig
rvykerlglppkivigyqshadtatksgsttknrfvv
Sequence, based on observed residues (ATOM records): (download)
>2v8yE (E:)
yikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcdysl
fkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcgav
vnvrakgdkiaiwttecenreavthigrvykerlglppkivigyqshadtsttknrfvv
- Chain 'F':
No sequence available.