PDB entry 2v6i

View 2v6i on RCSB PDB site
Description: kokobera virus helicase
Class: hydrolase
Keywords: membrane, helicase, hydrolase, RNA helicase, transmembrane, RNA replication, viral replication, nucleotide-binding
Deposited on 2007-07-18, released 2008-03-25
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.234
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA helicase
    Species: KOKOBERA VIRUS [TaxId:44024]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q32ZD5 (Start-430)
      • conflict (85)
      • conflict (167)
    Domains in SCOPe 2.03: d2v6ia1, d2v6ia2
  • Heterogens: POP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2v6iA (A:)
kreltvldlhpgagktrrvlpqlvreavkkrlrtvilaptrvvasemyealrgepirymt
pavqsertgneivdfmchstftmkllqgvrvpnynlyimdeahfldpasvaargyietrv
smgdagaifmtatppgtteafppsnspiideetripdkawnsgyewitefdgrtvwfvhs
ikqgaeigtclqkagkkvlylnrktfeseypkcksekwdfvittdisemganfkadrvid
prktikpilldgrvsmqgpiaitpasaaqrrgrigrnpeklgdiyaysgnvssdneghvs
wtearmlldnvhvqggvvaqlytperekteayegefklktnqrkvfselirtgdlpvwla
fqvasanveyhdrkwcfdgpnehlllennqeievwtrqgqrrvlkprwldgritsdhlnl
ksfkefasgkr

    Sequence, based on observed residues (ATOM records): (download) 
    >2v6iA (A:)
reltvldlhpgagktrrvlpqlvreavkkrlrtvilaptrvvasemyealrgepirymgn
eivdfmchstftmkllqgvrvpnynlyimdeahfldpasvaargyietrvsmgdagaifm
tatppgtteafppsnspiideetripdkawnsgyewitefdgrtvwfvhsikqgaeigtc
lqkagkkvlylnrktfeseypkcksekwdfvittdisemganfkadrvidprktikpill
dgrvsmqgpiaitpasaaqrrgrigrnpeklgdiyaysgnvssdneghvswtearmlldn
vhvqggvvaqlytperekteayegefklktnqrkvfselirtgdlpvwlafqvasanvey
hdrkwcfdgpnehlllennqeievwtrqgqrrvlkprwldgritsdhlnlksfkefasgk
r