PDB entry 2v5i

View 2v5i on RCSB PDB site
Description: structure of the receptor-binding protein of bacteriophage det7: a podoviral tailspike in a myovirus
Deposited on 2007-07-05, released 2008-02-19
The last revision was dated 2017-12-27, with a file datestamp of 2017-12-22.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: salmonella typhimurium db7155 bacteriophage det7 tailspike
    Species: BACTERIOPHAGE [TaxId:38018]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V5I (Start-558)
  • Heterogens: NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2v5iA (A:)
    mvsvgdaafrqeankkfkysvklsdystlqdavtdavdgllidinynftdgesvdfxgki
    ltinckakfigdgalifnnmgpgsvinqpfmeskttpwvifpwdadgkwitdaalvaatl
    kqskiegyqpgvndwvkfpgleallpqnvkdqhiaatldirsasrveirnagglmaaylf
    rschhckvidsdsiiggkdgiitfenlsgdwglgnyviggrvhygsgsgvqflrnngges
    hnggvigvtswragesgfktyqgsvgggtarnynlqfrdsvalspvwdgfdlgsdpgmap
    epdrpgdlpvseypfhqlpnnhlvdnilvmnslgvglgmdgsggyvsnvtvqdcagagml
    ahtynrvfsnitvidcnylnfdsdqiiiigdcivngiraagikpqpsnglvisapnstis
    glvgnvppdkilvgnlldpvlgqsrvigfnsdtaelalrinklsatldsgalrshlngya
    gsgsawteltalsgstpnavslkvnrgdyktteipisgtvlpdegvldintmslyldaga
    lwalirlpdgsktrmklsv
    

    Sequence, based on observed residues (ATOM records):
    >2v5iA (A:)
    aafrqeankkfkysvklsdystlqdavtdavdgllidinynftdgesvdfxgkiltinck
    akfigdgalifnnmgpgsvinqpfmeskttpwvifpwdadgkwitdaalvaatlkqskie
    gyqpgvndwvkfpgleallpqnvkdqhiaatldirsasrveirnagglmaaylfrschhc
    kvidsdsiiggkdgiitfenlsgdwglgnyviggrvhygsgsgvqflrnnggeshnggvi
    gvtswragesgfktyqgsvgggtarnynlqfrdsvalspvwdgfdlgsdpgmapepdrpg
    dlpvseypfhqlpnnhlvdnilvmnslgvglgmdgsggyvsnvtvqdcagagmlahtynr
    vfsnitvidcnylnfdsdqiiiigdcivngiraagikpqpsnglvisapnstisglvgnv
    ppdkilvgnlldpvlgqsrvigfnsdtaelalrinklsatldsgalrshlngyagsgsaw
    teltalsgstpnavslkvnrgdyktteipisgtvlpdegvldintmslyldagalwalir
    lpdgsktrmklsv