PDB entry 2v4e
View 2v4e on RCSB PDB site
Description: A non-cytotoxic DsRed variant for whole-cell labeling
Class: fluorescent protein
Keywords: dsred, chromophore, luminescence, photoprotein, fluorescent protein
Deposited on
2008-09-20, released
2008-11-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-02-06, with a file datestamp of
2019-02-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4ea_ - Chain 'B':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4eb_ - Chain 'C':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4ec_ - Chain 'D':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4ed_ - Chain 'E':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4ee_ - Chain 'F':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4ef_ - Chain 'G':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4eg_ - Chain 'H':
Compound: red fluorescent protein drfp583
Species: DISCOSOMA SP. [TaxId:86600]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2v4eh_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2v4eA (A:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklkvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
Sequence, based on observed residues (ATOM records): (download)
>2v4eA (A:)
vikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklkvtkggplpfawdilspqfm
ygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfig
vnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakkp
vklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2v4eB (B:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgvfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2v4eC (C:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2v4eD (D:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2v4eE (E:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
Sequence, based on observed residues (ATOM records): (download)
>2v4eE (E:)
vikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqfm
ygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfig
vnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakkp
vklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>2v4eF (F:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>2v4eG (G:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2v4eH (H:)
nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
pvklpgyyyvdsklditshnedytvveqyertearhhlfl