PDB entry 2v4e

View 2v4e on RCSB PDB site
Description: A non-cytotoxic DsRed variant for whole-cell labeling
Class: fluorescent protein
Keywords: dsred, chromophore, luminescence, photoprotein, fluorescent protein
Deposited on 2008-09-20, released 2008-11-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-02-06, with a file datestamp of 2019-02-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (Start-219)
    Domains in SCOPe 2.08: d2v4ea_
  • Chain 'B':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (0-219)
    Domains in SCOPe 2.08: d2v4eb_
  • Chain 'C':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (0-219)
    Domains in SCOPe 2.08: d2v4ec_
  • Chain 'D':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (0-219)
    Domains in SCOPe 2.08: d2v4ed_
  • Chain 'E':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (Start-219)
    Domains in SCOPe 2.08: d2v4ee_
  • Chain 'F':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (0-219)
    Domains in SCOPe 2.08: d2v4ef_
  • Chain 'G':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (0-219)
    Domains in SCOPe 2.08: d2v4eg_
  • Chain 'H':
    Compound: red fluorescent protein drfp583
    Species: DISCOSOMA SP. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • PDB 2V4E (0-219)
    Domains in SCOPe 2.08: d2v4eh_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2v4eA (A:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklkvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v4eA (A:)
    vikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklkvtkggplpfawdilspqfm
    ygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfig
    vnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakkp
    vklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2v4eB (B:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgvfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2v4eC (C:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2v4eD (D:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2v4eE (E:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v4eE (E:)
    vikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqfm
    ygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfig
    vnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakkp
    vklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2v4eF (F:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2v4eG (G:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2v4eH (H:)
    nvikpfmrfkvhmegsvnghefeiegegegkpyegtqtaklqvtkggplpfawdilspqf
    mygskvytkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgtfiyhvkfi
    gvnfpsdgpvmqkktlgwepsterlyprdgvlkgeihkalklkggghylcefksiymakk
    pvklpgyyyvdsklditshnedytvveqyertearhhlfl