PDB entry 2v41

View 2v41 on RCSB PDB site
Description: crystal structure of the c45s mutant of the peroxiredoxin 6 of arenicola marina. orthorhombic form
Class: oxidoreductase
Keywords: antioxidant enzymes, oxidoreductase, peroxiredoxins, arenicola marina
Deposited on 2007-06-27, released 2008-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.18
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41a_
  • Chain 'B':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41b_
  • Chain 'C':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22
      • engineered mutation (44)
    • PDB 2V41
    Domains in SCOPe 2.08: d2v41c_
  • Chain 'D':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41d_
  • Chain 'E':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41e_
  • Chain 'F':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41f_
  • Chain 'G':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41g_
  • Chain 'H':
    Compound: peroxiredoxin 6.
    Species: ARENICOLA MARINA [TaxId:6344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1AN22 (Start-219)
      • engineered mutation (44)
    • PDB 2V41 (220-End)
    Domains in SCOPe 2.08: d2v41h_
  • Heterogens: BEZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2v41A (A:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41A (A:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2v41B (B:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41B (B:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2v41C (C:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41C (C:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytp
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2v41D (D:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41D (D:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2v41E (E:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41E (E:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2v41F (F:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41F (F:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2v41G (G:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41G (G:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2v41H (H:)
    mgitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfk
    krgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpderts
    tgmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpg
    drcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpksmggsrshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2v41H (H:)
    gitlgevfpnfeadstigklkfhdwlgnswgvlfshprdftpvsttelgrviqlegdfkk
    rgvklialscdnvadhkewsedvkclsgvkgdmpypiiadetrelavklgmvdpdertst
    gmpltcravfiigpdkklklsilypattgrnfseilrvidslqltaqkkvatpadwqpgd
    rcmvvpgvsaeeaktlfpnmevkavpsgkgylrytpqpks