PDB entry 2v2t

View 2v2t on RCSB PDB site
Description: x-ray structure of a nf-kb p50-relb-DNA complex
Class: transcription
Keywords: 4-diphosphocytidyl-2c-methyl-d-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis, transcription, kinase, transferase, ATP-binding, non-mevalonate
Deposited on 2007-06-07, released 2007-07-03
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: 0.238
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: transcription factor relb
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2v2ta1, d2v2ta2
  • Chain 'B':
    Compound: Nuclear factor NF-kappa-B p105 subunit
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2v2tb1, d2v2tb2
  • Chain 'C':
    Compound: 5'-d(*cp*gp*gp*gp*ap*ap*tp*tp*cp*cp*cp)-3'
  • Chain 'D':
    Compound: 5'-d(*cp*gp*gp*gp*ap*ap*tp*tp*cp*cp*cp)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2v2tA (A:)
lgrlvspgpcprpylviteqpkqrgmrfryecegrsagsilgessteasktqpaielrdc
gglrevevtaclvwkdwphrvhphslvgkdctdgvcrvrlrphvsprhsfnnlgiqcvrk
keieaaierkiqlgidpynagslknhqevdmnvvricfqasyrdqqghlhrmdpilsepv
ydkkstntselricrinkesgpctggeelyllcdkvqkedisvvfstaswegradfsqad
vhrqiaivfktppyedleisepvtvnvflqrltdgvcseplpftylpr

    Sequence, based on observed residues (ATOM records): (download) 
    >2v2tA (A:)
cprpylviteqpkqrgmrfryecegrsagsilgessteasktqpaielrdcgglrevevt
aclvwkdwphrvhphslvgkdctdgvcrvrlrphvsprhsfnnlgiqcvrkkeieaaier
kiqlgidpynagslknhqevdmnvvricfqasyrdqqghlhrmdpilsepvydkkstnts
elricrinkesgpctggeelyllcdkvqkedisvvfstaswegradfsqadvhrqiaivf
ktppyedleisepvtvnvflqrltdgvcseplpftylpr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2v2tB (B:)
dgpylqileqpkqrgfrfryvcegpshgglpgasseknkksypqvkicnyvgpakvivql
vtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmte
acirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaf
lpdstgsftrrlepvvsdaiydskapnasnlkivrmdrtagcvtggeeiyllcdkvqkdd
iqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdl
etsepkpflyypeikdkeevqrkrqk

    Sequence, based on observed residues (ATOM records): (download) 
    >2v2tB (B:)
dgpylqileqpkqrgfrfryvcegpshgglpgasseknkksypqvkicnyvgpakvivql
vtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmte
acirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaf
lpdstgsftrrlepvvsdaiydskapnasnlkivrmdrtagcvtggeeiyllcdkvqkdd
iqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdl
etsepkpflyype

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.