PDB entry 2uy7

View 2uy7 on RCSB PDB site
Description: crystal structure of the p pilus rod subunit papa
Class: chaperone
Keywords: donor strand complementation, pili/n-terminal extension, pilus biogenesis, donor-strand exchange, nte, dsc, dse, papa, papd, fimbria, chaperone
Deposited on 2007-04-02, released 2007-05-29
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.2296
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: periplasmid chaperone papd protein
    Species: ESCHERICHIA COLI [TaxId:364106]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2uy7a1, d2uy7a2
  • Chain 'B':
    Compound: pap fimbrial major pilin protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04127 (Start-162)
      • engineered mutation (14)
    Domains in SCOPe 2.01: d2uy7b1
  • Chain 'C':
    Compound: periplasmid chaperone papd protein
    Species: ESCHERICHIA COLI [TaxId:364106]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2uy7c1, d2uy7c2
  • Chain 'D':
    Compound: pap fimbrial major pilin protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04127 (Start-162)
      • engineered mutation (14)
    Domains in SCOPe 2.01: d2uy7d_
  • Chain 'E':
    Compound: periplasmid chaperone papd protein
    Species: ESCHERICHIA COLI [TaxId:364106]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2uy7e1, d2uy7e2
  • Chain 'F':
    Compound: pap fimbrial major pilin protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04127 (Start-162)
      • engineered mutation (14)
    Domains in SCOPe 2.01: d2uy7f_
  • Chain 'G':
    Compound: periplasmid chaperone papd protein
    Species: ESCHERICHIA COLI [TaxId:364106]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2uy7g1, d2uy7g2
  • Chain 'H':
    Compound: pap fimbrial major pilin protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04127 (Start-162)
      • engineered mutation (14)
    Domains in SCOPe 2.01: d2uy7h_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2uy7A (A:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkkek
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7A (A:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkke
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2uy7B (B:)
    aptipqgqgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvn
    cditafkggngakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegd
    antlkdgenvlhytavvkkssavgaavtegafsavanfnltyq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7B (B:)
    qgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvncditafk
    ggngakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegdantlkdg
    envlhytavvkkssavgaavtegafsavanfnltyq
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2uy7C (C:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkkek
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7C (C:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkke
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2uy7D (D:)
    aptipqgqgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvn
    cditafkggngakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegd
    antlkdgenvlhytavvkkssavgaavtegafsavanfnltyq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7D (D:)
    qgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvncditafk
    ggakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegdantlkdgen
    vlhytavvkkssavgaavtegafsavanfnltyq
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2uy7E (E:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkkek
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7E (E:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkke
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2uy7F (F:)
    aptipqgqgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvn
    cditafkggngakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegd
    antlkdgenvlhytavvkkssavgaavtegafsavanfnltyq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7F (F:)
    qgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvncditafk
    ggngakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegdantlkdg
    envlhytavvkkssavgaavtegafsavanfnltyq
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2uy7G (G:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkkek
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7G (G:)
    avsldrtravfdgseksmtldisndnkqlpylaqawienenqekiitgpviatppvqrle
    pgaksmvrlsttpdisklpqdreslfyfnlreipprsekanvlqialqtkiklfyrpaai
    ktrpnevwqdqlilnkvsggyrienptpyyvtviglggsekqaeegefetvmlsprseqt
    vksanyntpylsyindyggrpvlsficngsrcsvkke
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2uy7H (H:)
    aptipqgqgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvn
    cditafkggngakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegd
    antlkdgenvlhytavvkkssavgaavtegafsavanfnltyq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2uy7H (H:)
    qgkvtfnntvvdapcsisqksadqsidfgqlsksfleaggvskpmdldielvncditafk
    ggakkgtvklaftgpivnghsdeldtnggtgtaivvqgagknvvfdgsegdantlkdgen
    vlhytavvkkssavgaavtegafsavanfnltyq