PDB entry 2uvv
View 2uvv on RCSB PDB site
Description: crystal structures of mutant dpo4 DNA polymerases with 8-oxog containing DNA template-primer constructs
Class: transferase
Keywords: DNA-directed DNA polymerase, p2 DNA polymerase IV, nucleotidyltransferase, 7, magnesium, DNA damage, DNA repair, DNA-binding, translesion DNA polymerase, transferase, DNA- binding, metal-binding, 8-dihydro-8-oxodeoxyguanosine, metal- binding, mutator protein, DNA replication
Deposited on
2007-03-14, released
2007-05-08
The last revision prior to the SCOP 1.73 freeze date was dated
2007-07-10, with a file datestamp of
2007-07-06.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.228
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase IV
Species: SULFOLOBUS SOLFATARICUS
Database cross-references and differences (RAF-indexed):
- PDB 2UVV (6-23)
- engineered mutation (337)
- Uniprot Q97W02 (6-End)
Domains in SCOP 1.73: d2uvva1, d2uvva2 - Chain 'P':
Compound: 5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap *tp*tp*cp*c)-3'
- Chain 'T':
Compound: 5'-d(*tp*cp*ap*cp*8ogp*gp*ap*ap*tp*cp *cp*tp*tp*cp*cp*cp*cp*c)-3'
- Heterogens: CA, DGT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2uvvA (A:)
hhhhhhmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfg
vkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdk
vrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrl
ireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeyn
epirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedld
ivsrgrtfphgisketaysesvkllqkileederkireigvrfskfieaigldkffdt
Sequence, based on observed residues (ATOM records): (download)
>2uvvA (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkireigvrfskfiea
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.