PDB entry 2rka

View 2rka on RCSB PDB site
Description: The Structure of rat cytosolic PEPCK in complex with phosphoglycolate
Class: lyase
Keywords: kinase, gluconeogenesis, lyase, Decarboxylase, GTP-binding, Nucleotide-binding
Deposited on 2007-10-16, released 2008-01-29
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.185
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2rkaa1, d2rkaa2
  • Chain 'C':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2rkac1, d2rkac2
  • Heterogens: PGA, MN, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2rkaA (A:)
gsmppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrlla
hmqeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwms
eedfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgt
svlealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggn
sllgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnp
tlpgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntift
nvaetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidp
awespegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhd
pfamrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvle
wmfgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyled
qvnadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >2rkaA (A:)
qlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqee
gvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedfe
kafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvlea
lgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgk
kcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgw
kvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaet
sdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawesp
egvpiegiifggrrpagvplvyealswqhgvfvgaamrseakvimhdpfamrpffgynfg
kylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsak
ltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeiere
lralkqrisqm

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2rkaC (C:)
gsmppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrlla
hmqeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwms
eedfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgt
svlealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggn
sllgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnp
tlpgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntift
nvaetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidp
awespegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhd
pfamrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvle
wmfgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyled
qvnadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >2rkaC (C:)
qlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqee
gvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedfe
kafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvlea
lgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgk
kcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgw
kvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaet
sdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawesp
egvpiegiifggrrpagvplvyealswqhgvfvgaamrseatkgkvimhdpfamrpffgy
nfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgrieged
sakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyei
erelralkqrisqm