PDB entry 2riy

View 2riy on RCSB PDB site
Description: B-specific-1,3-galactosyltransferase (GTB)+H-antigen acceptor
Class: transferase
Keywords: GTB ABO Rossman fold BBBB unliganded, Blood group antigen, Glycoprotein, Glycosyltransferase, Golgi apparatus, Manganese, Membrane, Metal-binding, Secreted, Signal-anchor, Transferase, Transmembrane
Deposited on 2007-10-13, released 2008-02-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-03-07, with a file datestamp of 2018-03-02.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glycoprotein-fucosylgalactoside alpha-galactosyltransferase
    Species: Homo sapiens [TaxId:9606]
    Gene: ABO
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16442 (2-End)
      • expression tag (0-1)
      • see remark 999 (173)
      • see remark 999 (204)
      • see remark 999 (206)
    Domains in SCOPe 2.08: d2riya2, d2riya3
  • Heterogens: BHE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2riyA (A:)
fmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvf
aikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgaykrw
qdvsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssr
eaftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwh
deshlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhqavrnpe

    Sequence, based on observed residues (ATOM records): (download) 
    >2riyA (A:)
fmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvf
aikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevsmrrme
misdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaftyerrp
qsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdeshlnkyl
lrhkptkvlspeylwdqqllgwpavlrklrftavp