PDB entry 2rgo

View 2rgo on RCSB PDB site
Description: Structure of Alpha-Glycerophosphate Oxidase from Streptococcus sp.: A Template for the Mitochondrial Alpha-Glycerophosphate Dehydrogenase
Deposited on 2007-10-04, released 2008-01-15
The last revision was dated 2009-09-29, with a file datestamp of 2009-09-25.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.238
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alpha-Glycerophosphate Oxidase
    Species: Streptococcus sp. [TaxId:1306]
    Gene: glpO
    Database cross-references and differences (RAF-indexed):
    • PDB 2RGO (0-End)
  • Chain 'B':
    Compound: Alpha-Glycerophosphate Oxidase
    Species: Streptococcus sp. [TaxId:1306]
    Gene: glpO
    Database cross-references and differences (RAF-indexed):
    • PDB 2RGO (0-606)
  • Heterogens: FAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2rgoA (A:)
    mfsnktrqdsiqkmqqeeldlliigggitgagvavqaaasgiktgliemqdfaegtssrs
    tklvhggirylktfdvevvadtvgeravvqgiaphipkpdpmllpiyedegattfnmfsv
    kvamdlydklanvtgtkyenytltpeevlerepflkkeglkgagvyldfrnndarlvidn
    ikkaaedgaylvskmkavgflyegdqivgvkardlltdevieikaklvintsgpwvdkvr
    nlnftrpvspkmrptkgihlvvdakklpvpqptyfdtgkqdgrmvfaiprenktyfgttd
    tdyqgdftdpkvtqedvdylldvinhrypeanitladieaswaglrpllignsgsdyngg
    dngsisdksfnkvvdtvseykenkvsraevedvlnhlensrdekapstisrgsslerepd
    glltlsggkitdyrkmaegalrlirqllkeeygietkeidskkyqisggnfdptkleetv
    telakegvaagleeedatyiadfygtnarrifelakemapypglslaesarlrygleeem
    vlapgdylirrtnhllferdqldeikqpvidaiaeyfgwteeekaqqtkrlealiaesdl
    relkgek
    

    Sequence, based on observed residues (ATOM records):
    >2rgoA (A:)
    mfsnktrqdsiqkmqqeeldlliigggitgagvavqaaasgiktgliemqdfaegtssrs
    tklvhggirylktfdvevvadtvgeravvqgiaphipkpdpmllpiyedegattfnmfsv
    kvamdlydklanvtgtkyenytltpeevlerepflkkeglkgagvyldfrnndarlvidn
    ikkaaedgaylvskmkavgflyegdqivgvkardlltdevieikaklvintsgpwvdkvr
    nlnftrpvspkmrptkgihlvvdakklpvpqptyfdtgkqdgrmvfaiprenktyfgttd
    tdyqgdftdpkvtqedvdylldvinhrypeanitladieaswaglrpllignsgsdyngg
    tisrgsslerepdglltlsggkitdyrkmaegalrlirqllkeeygietkeidskkyqis
    ggnfdptkleetvtelakegvaagleeedatyiadfygtnarrifelakeapypglslae
    sarlrygleeemvlapgdylirrtnhllferdqldeikqpvidaiaeyfgwteeekaqqt
    krlealiaesdlrelkg
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2rgoB (B:)
    mfsnktrqdsiqkmqqeeldlliigggitgagvavqaaasgiktgliemqdfaegtssrs
    tklvhggirylktfdvevvadtvgeravvqgiaphipkpdpmllpiyedegattfnmfsv
    kvamdlydklanvtgtkyenytltpeevlerepflkkeglkgagvyldfrnndarlvidn
    ikkaaedgaylvskmkavgflyegdqivgvkardlltdevieikaklvintsgpwvdkvr
    nlnftrpvspkmrptkgihlvvdakklpvpqptyfdtgkqdgrmvfaiprenktyfgttd
    tdyqgdftdpkvtqedvdylldvinhrypeanitladieaswaglrpllignsgsdyngg
    dngsisdksfnkvvdtvseykenkvsraevedvlnhlensrdekapstisrgsslerepd
    glltlsggkitdyrkmaegalrlirqllkeeygietkeidskkyqisggnfdptkleetv
    telakegvaagleeedatyiadfygtnarrifelakemapypglslaesarlrygleeem
    vlapgdylirrtnhllferdqldeikqpvidaiaeyfgwteeekaqqtkrlealiaesdl
    relkgek
    

    Sequence, based on observed residues (ATOM records):
    >2rgoB (B:)
    mfsnktrqdsiqkmqeldlliigggitgagvavqaaasgiktgliemqdfaegtssrstk
    lvhggirylktfdvevvadtvgeravvqgiaphipkpdpmllpiyedettfnmfsvkvam
    dlydklanvtgtkyenytltpeevlerepflkkeglkgagvyldfrnndarlvidnikka
    aedgaylvskmkavgflygdqivgvkardlltdevieikaklvintsgpwvdkvrnlnfp
    vspkmrptkgihlvvdakklpvpqptyfdtgkqdgrmvfaiprenktyfgttdtdyqgdf
    tdpkvtqedvdylldvinhrypeanitladieaswaglrpllignsgsdynggisrgssl
    erepdglltlsggkitdyrkmaegalrlirqllkeeygietkeidskkyqisggnfdptk
    edatyiadfygtnarrifelaapypglslaesarlrygleeemvlapgdylirrtnhllf
    erdqldeikqpvidaiaeyfgwteeekaqqtkrlealiaesdlrelkgek