PDB entry 2rfu
View 2rfu on RCSB PDB site
Description: Crystal structure of influenza B virus hemagglutinin in complex with LSTc receptor analog
Class: viral protein
Keywords: Influenza, receptor specificity, human receptor analog, Envelope protein, Fusion protein, Hemagglutinin, Membrane, Transmembrane, Virion, Glycoprotein, Lipoprotein, Palmitate, VIRAL PROTEIN
Deposited on
2007-10-01, released
2008-02-05
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.296
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Influenza B hemagglutinin (HA)
Species: Influenza B virus (STRAIN B/HONG KONG/8/73) [TaxId:11531]
Gene: Hemagglutinin
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2rfua_ - Chain 'B':
Compound: Influenza B hemagglutinin (HA)
Species: Influenza B virus (STRAIN B/HONG KONG/8/73) [TaxId:11531]
Gene: Hemagglutinin
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2rfub_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2rfuA (A:)
drictgitssnsphvvktatqgevnvtgvipltttptkshfanlkgtqtrgklcpnclnc
tdldvalgrpkcmgtipsakasilhevkpvtsgcfpimhdrtkirqlpnllrgyenirls
arnvtnaetapggpyivgtsgscpnvtngngffatmawavpknktatnpltvevpyictk
gedqitvwgfhsddetqmvklygdskpqkftssangvtthyvsqiggfpnqaedeglpqs
grivvdymvqkpgktgtiayqrgvllpqkvwcasgrskvikgslpligeadclhekyggl
nkskpyytgehakaigncpiwvktplklangtkyrppakllker
Sequence, based on observed residues (ATOM records): (download)
>2rfuA (A:)
drictgitssnsphvvktatqgevnvtgvipltttptkshfanlkgtqtrgklcpnclnc
tdldvalgrpkcmgtipsakasilhevkpvtsgcfpimhdrtkirqlpnllrgyenirls
arnvtnaetapggpyivgtsgscpnvtngngffatmawavpknktatnpltvevpyictk
gedqitvwgfhsddetqmvklygdskpqkftssangvtthyvsqiggfpnqaedeglpqs
grivvdymvqkpgktgtiayqrgvllpqkvwcasgrskvikgslpligeadclhekyggl
nkskpyytgehakaigncpiwvktplklangtkyrppakllk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2rfuB (B:)
gffgaiagfleggwegmiagwhgytshgahgvavaadlkstqeainkitknlnslselev
knlqrlsgamdelhneileldekvddlradtissqielavllsnegiinsedehllaler
klkkmlgpsavdigngcfetkhkcnqtcldriaagtfnagefslptfdslnitaas
Sequence, based on observed residues (ATOM records): (download)
>2rfuB (B:)
gffgaiagfleggwegmiagwhgytshgahgvavaadlkstqeainkitknlnslselev
knlqrlsgamdelhneileldekvddlradtissqielavllsnegiinsedehllaler
klkkmlgpsavdigngcfetkhkcnqtcldriaagtfnagefslptfds