PDB entry 2rfu

View 2rfu on RCSB PDB site
Description: Crystal structure of influenza B virus hemagglutinin in complex with LSTc receptor analog
Class: viral protein
Keywords: Influenza, receptor specificity, human receptor analog, Envelope protein, Fusion protein, Hemagglutinin, Membrane, Transmembrane, Virion, Glycoprotein, Lipoprotein, Palmitate, VIRAL PROTEIN
Deposited on 2007-10-01, released 2008-02-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Influenza B hemagglutinin (HA)
    Species: Influenza B virus [TaxId:11531]
    Gene: Hemagglutinin
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rfua_
  • Chain 'B':
    Compound: Influenza B hemagglutinin (HA)
    Species: Influenza B virus [TaxId:11531]
    Gene: Hemagglutinin
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rfub_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2rfuA (A:)
drictgitssnsphvvktatqgevnvtgvipltttptkshfanlkgtqtrgklcpnclnc
tdldvalgrpkcmgtipsakasilhevkpvtsgcfpimhdrtkirqlpnllrgyenirls
arnvtnaetapggpyivgtsgscpnvtngngffatmawavpknktatnpltvevpyictk
gedqitvwgfhsddetqmvklygdskpqkftssangvtthyvsqiggfpnqaedeglpqs
grivvdymvqkpgktgtiayqrgvllpqkvwcasgrskvikgslpligeadclhekyggl
nkskpyytgehakaigncpiwvktplklangtkyrppakllker

    Sequence, based on observed residues (ATOM records): (download) 
    >2rfuA (A:)
drictgitssnsphvvktatqgevnvtgvipltttptkshfanlkgtqtrgklcpnclnc
tdldvalgrpkcmgtipsakasilhevkpvtsgcfpimhdrtkirqlpnllrgyenirls
arnvtnaetapggpyivgtsgscpnvtngngffatmawavpknktatnpltvevpyictk
gedqitvwgfhsddetqmvklygdskpqkftssangvtthyvsqiggfpnqaedeglpqs
grivvdymvqkpgktgtiayqrgvllpqkvwcasgrskvikgslpligeadclhekyggl
nkskpyytgehakaigncpiwvktplklangtkyrppakllk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2rfuB (B:)
gffgaiagfleggwegmiagwhgytshgahgvavaadlkstqeainkitknlnslselev
knlqrlsgamdelhneileldekvddlradtissqielavllsnegiinsedehllaler
klkkmlgpsavdigngcfetkhkcnqtcldriaagtfnagefslptfdslnitaas

    Sequence, based on observed residues (ATOM records): (download) 
    >2rfuB (B:)
gffgaiagfleggwegmiagwhgytshgahgvavaadlkstqeainkitknlnslselev
knlqrlsgamdelhneileldekvddlradtissqielavllsnegiinsedehllaler
klkkmlgpsavdigngcfetkhkcnqtcldriaagtfnagefslptfds