PDB entry 2rex

View 2rex on RCSB PDB site
Description: Crystal structure of the effector domain of PLXNB1 bound with Rnd1 GTPase
Class: signaling protein/lipoprotein
Keywords: complex, Structural Genomics Consortium, SGC, gtpase, gnp, Plexin, effector domain, Glycoprotein, Membrane, Phosphorylation, Receptor, Secreted, Transmembrane, Cytoskeleton, GTP-binding, Lipoprotein, Methylation, Nucleotide-binding, Prenylation, SIGNALING PROTEIN-LIPOPROTEIN COMPLEX
Deposited on 2007-09-27, released 2007-11-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Plexin-B1
    Species: Homo sapiens [TaxId:9606]
    Gene: PLXNB1, KIAA0407, PLXN5, SEP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2rexa_
  • Chain 'B':
    Compound: rho-related GTP-binding protein rho6
    Species: Homo sapiens [TaxId:9606]
    Gene: RND1, RHO6
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2rexb_
  • Chain 'C':
    Compound: Plexin-B1
    Species: Homo sapiens [TaxId:9606]
    Gene: PLXNB1, KIAA0407, PLXN5, SEP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2rexc_
  • Chain 'D':
    Compound: rho-related GTP-binding protein rho6
    Species: Homo sapiens [TaxId:9606]
    Gene: RND1, RHO6
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2rexd_
  • Heterogens: UNX, MG, CA, GNP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2rexA (A:)
gdveyrpltlnallavgpgageaqgvpvkvldcdtisqakekmldqlykgvpltqrpdpr
tldvewrsgvaghlilsdedvtsevqglwrrlntlqhykvpdgatvalvpcltkhvlren
q

    Sequence, based on observed residues (ATOM records): (download) 
    >2rexA (A:)
yrpltlnallavgpgageaqgvpvkvldcdtisqakekmldqlykgvpltqrpdprtldv
ewrsgvaghlilsdedvtsevqglwrrlntlqhykvpdgatvalvpc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2rexB (B:)
grapqpvvarcklvlvgdvqcgktamlqvlakdcypetyvptvfenytacleteeqrvel
slwdtsgspyydnvrplcysdsdavllcfdisrpetvdsalkkwrteildycpstrvlli
gcktdlrtdlstlmelshqkqapisyeqgcaiakqlgaeiylegsaftseksihsifrta
smlclnkpsplpqkspv

    Sequence, based on observed residues (ATOM records): (download) 
    >2rexB (B:)
rcklvlvgdvqcgktamlqvlakdcypetyvptvfenytacleqrvelslwdtsgspyyd
nvrplcysdsdavllcfdisrpetvalkkwrteildycpstrvlligcktdlrtdlstlm
elshqkqapisyeqgcaiakqlgaeiylegsaftseksihsifrtasmlcl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2rexC (C:)
gdveyrpltlnallavgpgageaqgvpvkvldcdtisqakekmldqlykgvpltqrpdpr
tldvewrsgvaghlilsdedvtsevqglwrrlntlqhykvpdgatvalvpcltkhvlren
q

    Sequence, based on observed residues (ATOM records): (download) 
    >2rexC (C:)
yrpltlnallavgpgageaqgvpvkvldcdtisqakekmldqlykgvpltqrpdprtldv
ewrsgvaghlilsdedvtsevqglwrrlntlqhykvpdgatvalvpc

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2rexD (D:)
grapqpvvarcklvlvgdvqcgktamlqvlakdcypetyvptvfenytacleteeqrvel
slwdtsgspyydnvrplcysdsdavllcfdisrpetvdsalkkwrteildycpstrvlli
gcktdlrtdlstlmelshqkqapisyeqgcaiakqlgaeiylegsaftseksihsifrta
smlclnkpsplpqkspv

    Sequence, based on observed residues (ATOM records): (download) 
    >2rexD (D:)
pqpvvarcklvlvgdvqcgktamlqvlakdcypetyvptvfenytacleteeqrvelslw
dtsgspyydnvrplcysdsdavllcfdisrpetvalkkwrteildycpstrvlligcktd
lrtdlstlmelshqkqapisyeqgcaiakqlgaeiylegsaftseksihsifrtasmlcl