PDB entry 2rdz

View 2rdz on RCSB PDB site
Description: High Resolution Crystal Structure of the Escherichia coli Cytochrome c Nitrite Reductase.
Class: oxidoreductase
Keywords: decaheme, reductase, Electron transport, Iron, Metal-binding, Oxidoreductase, Transport
Deposited on 2007-09-25, released 2008-03-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-06-24, with a file datestamp of 2015-06-19.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytochrome c-552
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rdza_
  • Chain 'B':
    Compound: Cytochrome c-552
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rdzb_
  • Chain 'C':
    Compound: Cytochrome c-552
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rdzc_
  • Chain 'D':
    Compound: Cytochrome c-552
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rdzd_
  • Heterogens: CA, HEC, SO4, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2rdzA (A:)
    eqtaapakpvtveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsr
    dynkprghafavtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgk
    warggpeivnnlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqs
    mvcgqchveyyfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpe
    yetwtagihgknnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalq
    kvvaerkqsindlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaia
    shgihmhapeeglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaigl
    nmeqikaekqdfiktvipqweeqarkngllsq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2rdzA (A:)
    tveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsrdynkprghaf
    avtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgkwarggpeivn
    nlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqsmvcgqchvey
    yfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpeyetwtagihg
    knnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalqkvvaerkqsi
    ndlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaiashgihmhape
    eglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaiglnmeqikaekq
    dfiktvipqweeqarknglls
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2rdzB (B:)
    eqtaapakpvtveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsr
    dynkprghafavtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgk
    warggpeivnnlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqs
    mvcgqchveyyfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpe
    yetwtagihgknnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalq
    kvvaerkqsindlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaia
    shgihmhapeeglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaigl
    nmeqikaekqdfiktvipqweeqarkngllsq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2rdzB (B:)
    tveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsrdynkprghaf
    avtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgkwarggpeivn
    nlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqsmvcgqchvey
    yfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpeyetwtagihg
    knnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalqkvvaerkqsi
    ndlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaiashgihmhape
    eglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaiglnmeqikaekq
    dfiktvipqweeqarknglls
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2rdzC (C:)
    eqtaapakpvtveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsr
    dynkprghafavtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgk
    warggpeivnnlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqs
    mvcgqchveyyfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpe
    yetwtagihgknnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalq
    kvvaerkqsindlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaia
    shgihmhapeeglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaigl
    nmeqikaekqdfiktvipqweeqarkngllsq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2rdzC (C:)
    tveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsrdynkprghaf
    avtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgkwarggpeivn
    nlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqsmvcgqchvey
    yfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpeyetwtagihg
    knnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalqkvvaerkqsi
    ndlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaiashgihmhape
    eglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaiglnmeqikaekq
    dfiktvipqweeqarknglls
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2rdzD (D:)
    eqtaapakpvtveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsr
    dynkprghafavtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgk
    warggpeivnnlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqs
    mvcgqchveyyfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpe
    yetwtagihgknnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalq
    kvvaerkqsindlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaia
    shgihmhapeeglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaigl
    nmeqikaekqdfiktvipqweeqarkngllsq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2rdzD (D:)
    tveaknetfapqhpdqylswkatseqservdalaedprlvilwagypfsrdynkprghaf
    avtdvretlrtgapknaedgplpmacwsckspdvarliqkdgedgyfhgkwarggpeivn
    nlgcadchntaspefakgkpeltlsrpyaarameaigkpfekagrfdqqsmvcgqchvey
    yfdgknkavkfpwddgmkvenmeqyydkiafsdwtnslsktpmlkaqhpeyetwtagihg
    knnvtcidchmpkvqnaegklytdhkignpfdnfaqtcanchtqdkaalqkvvaerkqsi
    ndlkikvedqlvhahfeakaaldagateaemkpiqddirhaqwrwdlaiashgihmhape
    eglrmlgtamdkaadartklarllatkgitheiqipdistkekaqqaiglnmeqikaekq
    dfiktvipqweeqarknglls