PDB entry 2rba

View 2rba on RCSB PDB site
Description: Structure of Human Thymine DNA Glycosylase Bound to Abasic and Undamaged DNA
Deposited on 2007-09-18, released 2008-06-17
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.79 Å
R-factor: 0.232
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: G/T mismatch-specific thymine DNA glycosylase
    Species: HOMO SAPIENS
    Gene: TDG
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: G/T mismatch-specific thymine DNA glycosylase
    Species: HOMO SAPIENS
    Gene: TDG
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA (5'-d(*dcp*dap*dgp*dcp*dtp*dcp*dtp*dgp*dtp*dap*dcp*dgp*dtp*dgp*dap*dgp*dcp*dap*dgp*dtp*dgp*dgp*da)-3')
  • Chain 'D':
    Compound: DNA (5'-d(*dcp*dcp*dap*dcp*dtp*dgp*dcp*dtp*dcp*dap*(3dr)p*dgp*dtp*dap*dcp*dap*dgp*dap*dgp*dcp*dtp*dgp*dt)-3')

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2rbaA (A:)
gshmasfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclf
msglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqp
riavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssarcaqfpraqd
kvhyyiklkdlrdqlkgiernmdv

    Sequence, based on observed residues (ATOM records):
    >2rbaA (A:)
tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlp
gkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkciyeifskev
fgvkvknlefglqphkipdtetlcyvmpsssarcaqfpraqdkvhyyiklkdlrdqlkgi
er

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2rbaB (B:)
gshmasfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclf
msglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqp
riavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssarcaqfpraqd
kvhyyiklkdlrdqlkgiernmdv

    Sequence, based on observed residues (ATOM records):
    >2rbaB (B:)
tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlp
gkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkciyeifskev
fgvkvknlefglqphkipdtetlcyvmpsssarcaqfpraqdkvhyyiklkdlrdqlkgi
er

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.