PDB entry 2rb7

View 2rb7 on RCSB PDB site
Description: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from desulfovibrio desulfuricans g20 at 1.60 a resolution
Deposited on 2007-09-18, released 2007-10-02
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidase, M20/M25/M40 family
    Species: Desulfovibrio desulfuricans [TaxId:207559]
    Gene: YP_387682.1, Dde_1186
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q313A9 (1-End)
      • leader sequence (0)
  • Chain 'B':
    Compound: Peptidase, M20/M25/M40 family
    Species: Desulfovibrio desulfuricans [TaxId:207559]
    Gene: YP_387682.1, Dde_1186
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q313A9 (1-End)
      • leader sequence (0)
  • Heterogens: PGE, PEG, PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2rb7A (A:)
    gmssmqhiveltsdlirfpsmhsrpeqisrcagfimdwcaqngihaermdhdgipsvmvl
    pekgraglllmahidvvdaeddlfvprvendrlygrganddkyavalglvmfrdrlnalk
    aagrsqkdmalgllitgdeeiggmngaakalpliradyvvaldggnpqqvitkekgiidi
    kltctgkaahgarpwmgvnavdllmedytrlktlfaeenedhwhrtvnlgriragestnk
    vpdvaegwfnirvtehddpgalidkirktvsgtvsivrtvpvflaadspyterllalsga
    tagkahgasdarylgengltgvvwgaegfntlhsrdeclhipslqsiydplmqlaremee
    haav
    

    Sequence, based on observed residues (ATOM records):
    >2rb7A (A:)
    gmssmqhiveltsdlirfpsmhsrpeqisrcagfimdwcaqngihaermdhdgipsvmvl
    pekgraglllmahidvvdaeddlfvprvendrlygrganddkyavalglvmfrdrlnalk
    aagrsqkdmalgllitgdeeiggmngaakalpliradyvvaldggnpqqvitkekgiidi
    kltctgkaahgarpwmgvnavdllmedytrlktlfaeenedhwhrtvnlgriragestnk
    vpdvaegwfnirvtehddpgalidkirktvsgtvsivrtvpvflaadspyterllalsga
    tagkahgasdarylgengltgvvwgaegfntlhsrdeclhipslqsiydplmqlaremee
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2rb7B (B:)
    gmssmqhiveltsdlirfpsmhsrpeqisrcagfimdwcaqngihaermdhdgipsvmvl
    pekgraglllmahidvvdaeddlfvprvendrlygrganddkyavalglvmfrdrlnalk
    aagrsqkdmalgllitgdeeiggmngaakalpliradyvvaldggnpqqvitkekgiidi
    kltctgkaahgarpwmgvnavdllmedytrlktlfaeenedhwhrtvnlgriragestnk
    vpdvaegwfnirvtehddpgalidkirktvsgtvsivrtvpvflaadspyterllalsga
    tagkahgasdarylgengltgvvwgaegfntlhsrdeclhipslqsiydplmqlaremee
    haav
    

    Sequence, based on observed residues (ATOM records):
    >2rb7B (B:)
    gmssmqhiveltsdlirfpsmhsrpeqisrcagfimdwcaqngihaermdhdgipsvmvl
    pekgraglllmahidvvdaeddlfvprvendrlygrganddkyavalglvmfrdrlnalk
    aagrsqkdmalgllitgdeeiggmngaakalpliradyvvaldggnpqqvitkekgiidi
    kltctgkaahgarpwmgvnavdllmedytrlktlfaeenedhwhrtvnlgriragestnk
    vpdvaegwfnirvtehddpgalidkirktvsgtvsivrtvpvflaadspyterllalsga
    tagkahgasdarylgengltgvvwgaegfntlhsrdeclhipslqsiydplmqlaremee