PDB entry 2raf

View 2raf on RCSB PDB site
Description: crystal structure of putative dinucleotide-binding oxidoreductase (np_786167.1) from lactobacillus plantarum at 1.60 a resolution
Deposited on 2007-09-14, released 2007-10-02
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative Dinucleotide-Binding Oxidoreductase
    Species: Lactobacillus plantarum [TaxId:220668]
    Gene: NP_786167.1, lp_2792
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Putative Dinucleotide-Binding Oxidoreductase
    Species: Lactobacillus plantarum [TaxId:220668]
    Gene: NP_786167.1, lp_2792
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q88TW8 (19-208)
      • leader sequence (2-18)
  • Chain 'C':
    Compound: Putative Dinucleotide-Binding Oxidoreductase
    Species: Lactobacillus plantarum [TaxId:220668]
    Gene: NP_786167.1, lp_2792
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAP, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2rafA (A:)
mgsdkihhhhhhenlyfqgmeitifgkgnmgqaighnfeiaghevtyygskdqattlgei
vimavpypalaalakqyatqlkgkivvditnplnfdtwddlvvpadssaaqelqqqlpds
qvlkafnttfaatlqsgqvngkepttvlvagnddsakqrftraladsplevkdagklkra
releamgfmqmtlaaseqigwtggfavvk

    Sequence, based on observed residues (ATOM records):
    >2rafA (A:)
meitifgkgnmgqaighnfeiaghevtyygskdqattlgeivimavpypalaalakqyat
qlkgkivvditnplnfdtwddlvvpadssaaqelqqqlpdsqvlkafnttfaatlqsgqv
ngkepttvlvagnddsakqrftraladsplevkdagklkrareleamgfmqmtlaaseqi
gwtggfavvk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2rafB (B:)
mgsdkihhhhhhenlyfqgmeitifgkgnmgqaighnfeiaghevtyygskdqattlgei
vimavpypalaalakqyatqlkgkivvditnplnfdtwddlvvpadssaaqelqqqlpds
qvlkafnttfaatlqsgqvngkepttvlvagnddsakqrftraladsplevkdagklkra
releamgfmqmtlaaseqigwtggfavvk

    Sequence, based on observed residues (ATOM records):
    >2rafB (B:)
sdkihhhhhhenlyfqgmeitifgkgnmgqaighnfeiaghevtyygskdqattlgeivi
mavpypalaalakqyatqlkgkivvditnplnfdtwddlvvpadssaaqelqqqlpdsqv
lkafnttfaatlqsgqvngkepttvlvagnddsakqrftraladsplevkdagklkrare
leamgfmqmtlaaseqigwtggfavvk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2rafC (C:)
mgsdkihhhhhhenlyfqgmeitifgkgnmgqaighnfeiaghevtyygskdqattlgei
vimavpypalaalakqyatqlkgkivvditnplnfdtwddlvvpadssaaqelqqqlpds
qvlkafnttfaatlqsgqvngkepttvlvagnddsakqrftraladsplevkdagklkra
releamgfmqmtlaaseqigwtggfavvk

    Sequence, based on observed residues (ATOM records):
    >2rafC (C:)
meitifgkgnmgqaighnfeiaghevtyygskdqattlgeivimavpypalaalakqyat
qlkgkivvditnplnfdtwddlvvpadssaaqelqqqlpdsqvlkafnttfaatlqsgqv
ngkepttvlvagnddsakqrftraladsplevkdagklkrareleamgfmqmtlaaseqi
gwtggfavvk