PDB entry 2r9u

View 2r9u on RCSB PDB site
Description: Crystal Structure of Lamprey Variable Lymphocyte Receptor 2913 Ectodomain
Class: immune system
Keywords: Adaptive immunity, VLR, Leucine-rich repeat, LRR, Receptor, IMMUNE SYSTEM
Deposited on 2007-09-13, released 2009-03-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.22
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Variable lymphocyte receptor
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6E4B4 (5-173)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d2r9ua1, d2r9ua2
  • Chain 'B':
    Compound: Variable lymphocyte receptor
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6E4B4 (5-173)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d2r9ub1, d2r9ub2
  • Chain 'C':
    Compound: Variable lymphocyte receptor
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6E4B4 (5-173)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d2r9uc1, d2r9uc2
  • Chain 'D':
    Compound: Variable lymphocyte receptor
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6E4B4 (5-173)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d2r9ud1, d2r9ud2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2r9uA (A:)
hhsagcpsqcscdqtlvncqnirlasvpagiptdkqrlwlnnnqitklepgvfdhlvnlq
qlyfnsnkltaiptgvfdkltqltqldlndnhlksiprgafdnlkslthiylynnpwdce
crdimylrnwvadhtsivmrwdgkavndpdsakcagtntpvravteastspskc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2r9uB (B:)
hhsagcpsqcscdqtlvncqnirlasvpagiptdkqrlwlnnnqitklepgvfdhlvnlq
qlyfnsnkltaiptgvfdkltqltqldlndnhlksiprgafdnlkslthiylynnpwdce
crdimylrnwvadhtsivmrwdgkavndpdsakcagtntpvravteastspskc

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2r9uC (C:)
hhsagcpsqcscdqtlvncqnirlasvpagiptdkqrlwlnnnqitklepgvfdhlvnlq
qlyfnsnkltaiptgvfdkltqltqldlndnhlksiprgafdnlkslthiylynnpwdce
crdimylrnwvadhtsivmrwdgkavndpdsakcagtntpvravteastspskc

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2r9uD (D:)
hhsagcpsqcscdqtlvncqnirlasvpagiptdkqrlwlnnnqitklepgvfdhlvnlq
qlyfnsnkltaiptgvfdkltqltqldlndnhlksiprgafdnlkslthiylynnpwdce
crdimylrnwvadhtsivmrwdgkavndpdsakcagtntpvravteastspskc