SCOPe 2.04: Structural Classification of Proteins

PDB entry 2r8y

View 2r8y on RCSB PDB site
Description: Crystal structure of YrbI phosphatase from Escherichia coli in a complex with Ca
Class: hydrolase
Keywords: YrbI, phosphatase, divalent metal, ca, HAD superfamily, KDO8-P, HYDROLASE
Deposited on 2007-09-11, released 2008-09-23
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-11-03, with a file datestamp of 2009-10-30.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.215
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8ya_
Chain 'B':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yb_
Chain 'C':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yc_
Chain 'D':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yd_
Chain 'E':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8ye_
Chain 'F':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653
Domains in SCOPe 2.04: d2r8yf_
Chain 'G':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yg_
Chain 'H':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yh_
Chain 'I':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yi_
Chain 'J':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yj_
Chain 'K':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yk_
Chain 'L':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yl_
Chain 'M':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8ym_
Chain 'N':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yn_
Chain 'O':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yo_
Chain 'P':
Compound: YrbI from Escherichia coli
Species: Escherichia coli [TaxId:562]
Gene: yrbI
Database cross-references and differences (RAF-indexed):
- Uniprot P67653 (Start-187)
Domains in SCOPe 2.04: d2r8yp_
Heterogens: CA, CL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2r8yA (A:)
mskagaslatcygpvsadvmakaenirllildvdgvlsdgliymgnngeelkafnvrdgy
gircaltsdievaiitgrkaklvedrcatlgithlyqgqsnkliafsdlleklaiapenv
ayvgddlidwpvmekvglsvavadahpllipradyvtriaggrgavrevcdllllaqgkl
deakgqsi