PDB entry 2r6h

View 2r6h on RCSB PDB site
Description: Crystal structure of the domain comprising the NAD binding and the FAD binding regions of the NADH:ubiquinone oxidoreductase, Na translocating, F subunit from Porphyromonas gingivalis
Deposited on 2007-09-05, released 2007-09-11
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: 0.221
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NADH:ubiquinone oxidoreductase, Na translocating, F subunit
    Species: Porphyromonas gingivalis [TaxId:242619]
    Gene: nqrF, PG_2177
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: NADH:ubiquinone oxidoreductase, Na translocating, F subunit
    Species: Porphyromonas gingivalis [TaxId:242619]
    Gene: nqrF, PG_2177
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: NADH:ubiquinone oxidoreductase, Na translocating, F subunit
    Species: Porphyromonas gingivalis [TaxId:242619]
    Gene: nqrF, PG_2177
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7MT22 (3-289)
      • expression tag (1-2)
  • Chain 'D':
    Compound: NADH:ubiquinone oxidoreductase, Na translocating, F subunit
    Species: Porphyromonas gingivalis [TaxId:242619]
    Gene: nqrF, PG_2177
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, FAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2r6hA (A:)
snavfgvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadyd
iqdrfrgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwk
agikpgisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfr
tlktgrkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihq
viydnylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddfg

    Sequence, based on observed residues (ATOM records):
    >2r6hA (A:)
gvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadydiqdrf
rgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwkagikp
gisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfrtlktg
rkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihqviydn
ylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddfg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2r6hB (B:)
snavfgvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadyd
iqdrfrgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwk
agikpgisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfr
tlktgrkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihq
viydnylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddfg

    Sequence, based on observed residues (ATOM records):
    >2r6hB (B:)
vfgvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadydiqd
rfrgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwkagi
kpgisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfrtlk
tgrkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihqviy
dnylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2r6hC (C:)
snavfgvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadyd
iqdrfrgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwk
agikpgisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfr
tlktgrkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihq
viydnylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddfg

    Sequence, based on observed residues (ATOM records):
    >2r6hC (C:)
navfgvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadydi
qdrfrgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwka
gikpgisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfrt
lktgrkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihqv
iydnylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddfg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2r6hD (D:)
snavfgvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadyd
iqdrfrgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwk
agikpgisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfr
tlktgrkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihq
viydnylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddfg

    Sequence, based on observed residues (ATOM records):
    >2r6hD (D:)
gvkewecevlsnknvstfikefvvklpegetmnfksgsyaqikipkyniryadydiqdrf
rgdwdkmdawsltckneeetvraysmanypaegniitlnvriatppfdraankwkagikp
gisssyifslkpgdkvmmsgpygdfhiqdtdaemlyigggagmaplraqilhlfrtlktg
rkvsywygarskneifyeedfreierefpnfkfhialsdpqpednwtgyvgfihqviydn
ylkdhdapedieyymcgpgpmanavkgmlenlgvprnmlffddf