PDB entry 2r69
View 2r69 on RCSB PDB site
Description: Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution
Class: viral protein/Immune system
Keywords: Fab-antigen complex, Capsid protein, Cleavage on pair of basic residues, Core protein, Envelope protein, Glycoprotein, Membrane, Transmembrane, Virion, viral protein-Immune system COMPLEX
Deposited on
2007-09-05, released
2007-12-25
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-01-24, with a file datestamp of
2018-01-19.
Experiment type: XRAY
Resolution: 3.8 Å
R-factor: N/A
AEROSPACI score: 0.03
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: major envelope protein E
Species: Dengue virus [TaxId:31634]
Gene: E protein
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2r69a1 - Chain 'H':
Compound: Heavy chain of 1A1D-2
Species: Mus musculus [TaxId:10090]
Gene: immunoglobulin
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Light chain of 1A1D-2
Species: Mus musculus [TaxId:10090]
Gene: immunoglobulin
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2r69l1, d2r69l2
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2r69A (A:)
sysmctgkfkvvkeiaetqhgtivirvqyegdgspckipfeimdlekrhvlgrlitvnpi
vtekdspvnieaeppfgdsyiiigvepgqlklnwfkk
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>2r69L (L:)
divltqspaslavslgqratiscrasesvvrygnsfmhwyqqkpgqppklliyrassles
giptrfsgsgsrtdftltinpveaddvatyycqqtnvdpwafgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceatspivksfnrne
Sequence, based on observed residues (ATOM records): (download)
>2r69L (L:)
divltqspaslavslgqratiscrasesvvrygnsfmhwyqqkpgqppklliyrassles
giptrfsgsgsrtdftltinpveaddvatyycqqtnvdpwafgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceatksf