PDB entry 2r2d

View 2r2d on RCSB PDB site
Description: structure of a quorum-quenching lactonase (aiib) from agrobacterium tumefaciens
Deposited on 2007-08-24, released 2007-10-09
The last revision was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Zn-dependent hydrolases
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: aiiB
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Zn-dependent hydrolases
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: aiiB
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Zn-dependent hydrolases
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: aiiB
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Zn-dependent hydrolases
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: aiiB
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Zn-dependent hydrolases
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: aiiB
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Zn-dependent hydrolases
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: aiiB
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, PO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2r2dA (A:)
mgnklfvldlgeirvdenfiianstfvtpqkptvssrlidipvsayliqctdatvlydtg
chpecmgtngrwpaqsqlnapyigasecnlperlrqlglspddistvvlshlhndhagcv
eyfgksrliahedefatavryfatgdhsspyivkdieawlatprnwdlvgrdererelap
gvnllnfgtghasgmlglavrlekqpgfllvsdacytatnygpparragvlhdtigydrt
vshirqyaesrsltvlfghdreqfaslikstdgfye

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2r2dB (B:)
mgnklfvldlgeirvdenfiianstfvtpqkptvssrlidipvsayliqctdatvlydtg
chpecmgtngrwpaqsqlnapyigasecnlperlrqlglspddistvvlshlhndhagcv
eyfgksrliahedefatavryfatgdhsspyivkdieawlatprnwdlvgrdererelap
gvnllnfgtghasgmlglavrlekqpgfllvsdacytatnygpparragvlhdtigydrt
vshirqyaesrsltvlfghdreqfaslikstdgfye

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2r2dC (C:)
mgnklfvldlgeirvdenfiianstfvtpqkptvssrlidipvsayliqctdatvlydtg
chpecmgtngrwpaqsqlnapyigasecnlperlrqlglspddistvvlshlhndhagcv
eyfgksrliahedefatavryfatgdhsspyivkdieawlatprnwdlvgrdererelap
gvnllnfgtghasgmlglavrlekqpgfllvsdacytatnygpparragvlhdtigydrt
vshirqyaesrsltvlfghdreqfaslikstdgfye

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2r2dD (D:)
mgnklfvldlgeirvdenfiianstfvtpqkptvssrlidipvsayliqctdatvlydtg
chpecmgtngrwpaqsqlnapyigasecnlperlrqlglspddistvvlshlhndhagcv
eyfgksrliahedefatavryfatgdhsspyivkdieawlatprnwdlvgrdererelap
gvnllnfgtghasgmlglavrlekqpgfllvsdacytatnygpparragvlhdtigydrt
vshirqyaesrsltvlfghdreqfaslikstdgfye

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2r2dE (E:)
mgnklfvldlgeirvdenfiianstfvtpqkptvssrlidipvsayliqctdatvlydtg
chpecmgtngrwpaqsqlnapyigasecnlperlrqlglspddistvvlshlhndhagcv
eyfgksrliahedefatavryfatgdhsspyivkdieawlatprnwdlvgrdererelap
gvnllnfgtghasgmlglavrlekqpgfllvsdacytatnygpparragvlhdtigydrt
vshirqyaesrsltvlfghdreqfaslikstdgfye

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >2r2dF (F:)
mgnklfvldlgeirvdenfiianstfvtpqkptvssrlidipvsayliqctdatvlydtg
chpecmgtngrwpaqsqlnapyigasecnlperlrqlglspddistvvlshlhndhagcv
eyfgksrliahedefatavryfatgdhsspyivkdieawlatprnwdlvgrdererelap
gvnllnfgtghasgmlglavrlekqpgfllvsdacytatnygpparragvlhdtigydrt
vshirqyaesrsltvlfghdreqfaslikstdgfye